Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PRIM2P49643 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PRIM2P49643 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 RNF152P1-201ENST00000397754 604 ntBASIC16.84■□□□□ 0.29
PRIM2P49643 SPDYE15P-201ENST00000424157 909 ntBASIC16.84■□□□□ 0.29
PRIM2P49643 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.84■□□□□ 0.29
PRIM2P49643 HOMER2P1-201ENST00000455653 964 ntBASIC16.84■□□□□ 0.29
PRIM2P49643 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
PRIM2P49643 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.84■□□□□ 0.29
PRIM2P49643 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.84■□□□□ 0.29
PRIM2P49643 AC079602.3-201ENST00000623931 403 ntBASIC16.84■□□□□ 0.29
PRIM2P49643 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.84■□□□□ 0.29
PRIM2P49643 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.84■□□□□ 0.29
PRIM2P49643 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PRIM2P49643 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PRIM2P49643 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.84■□□□□ 0.29
PRIM2P49643 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.84■□□□□ 0.29
PRIM2P49643 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PRIM2P49643 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
PRIM2P49643 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRIM2P49643 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PRIM2P49643 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.83■□□□□ 0.29
PRIM2P49643 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRIM2P49643 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRIM2P49643 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRIM2P49643 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRIM2P49643 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PRIM2P49643 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRIM2P49643 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRIM2P49643 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.83■□□□□ 0.28
PRIM2P49643 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRIM2P49643 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.83■□□□□ 0.28
PRIM2P49643 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.83■□□□□ 0.28
PRIM2P49643 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.83■□□□□ 0.28
PRIM2P49643 TSPY5P-201ENST00000426936 936 ntBASIC16.83■□□□□ 0.28
PRIM2P49643 KRT18P48-201ENST00000434763 852 ntBASIC16.83■□□□□ 0.28
PRIM2P49643 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.83■□□□□ 0.28
PRIM2P49643 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRIM2P49643 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRIM2P49643 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.83■□□□□ 0.28
PRIM2P49643 LINC00167-201ENST00000530583 1419 ntBASIC16.83■□□□□ 0.28
PRIM2P49643 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRIM2P49643 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.83■□□□□ 0.28
PRIM2P49643 AC108860.2-201ENST00000562760 2183 ntBASIC16.83■□□□□ 0.28
PRIM2P49643 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.83■□□□□ 0.28
PRIM2P49643 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.83■□□□□ 0.28
PRIM2P49643 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.83■□□□□ 0.28
PRIM2P49643 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRIM2P49643 AL023806.1-201ENST00000603994 1649 ntBASIC16.83■□□□□ 0.28
PRIM2P49643 AC116407.2-201ENST00000613639 860 ntBASIC16.83■□□□□ 0.28
PRIM2P49643 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRIM2P49643 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRIM2P49643 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PRIM2P49643 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.83■□□□□ 0.28
PRIM2P49643 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PRIM2P49643 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PRIM2P49643 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRIM2P49643 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.82■□□□□ 0.28
PRIM2P49643 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
PRIM2P49643 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.82■□□□□ 0.28
PRIM2P49643 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.82■□□□□ 0.28
PRIM2P49643 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PRIM2P49643 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRIM2P49643 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PRIM2P49643 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.82■□□□□ 0.28
PRIM2P49643 TNRC18P3-201ENST00000441896 2691 ntBASIC16.82■□□□□ 0.28
PRIM2P49643 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
PRIM2P49643 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRIM2P49643 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms