Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRP9P49458 AC104390.1-201ENST00000555663 520 ntBASIC15.73■□□□□ 0.11
SRP9P49458 LINC01238-205ENST00000567549 1107 ntBASIC15.73■□□□□ 0.11
SRP9P49458 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRP9P49458 MIR3180-4-201ENST00000582223 153 ntBASIC15.73■□□□□ 0.11
SRP9P49458 AC139887.4-201ENST00000607877 719 ntBASIC15.73■□□□□ 0.11
SRP9P49458 AC024243.1-201ENST00000609234 778 ntBASIC15.73■□□□□ 0.11
SRP9P49458 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRP9P49458 AL023973.1-201ENST00000624619 620 ntBASIC15.73■□□□□ 0.11
SRP9P49458 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP9P49458 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
SRP9P49458 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP9P49458 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP9P49458 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRP9P49458 MYLKP1-201ENST00000509077 1580 ntBASIC15.73■□□□□ 0.11
SRP9P49458 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SRP9P49458 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP9P49458 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.73■□□□□ 0.11
SRP9P49458 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.73■□□□□ 0.11
SRP9P49458 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.73■□□□□ 0.11
SRP9P49458 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
SRP9P49458 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP9P49458 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SRP9P49458 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP9P49458 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 RNF152P1-201ENST00000397754 604 ntBASIC15.72■□□□□ 0.11
SRP9P49458 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SRP9P49458 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.72■□□□□ 0.11
SRP9P49458 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.72■□□□□ 0.11
SRP9P49458 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP9P49458 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.72■□□□□ 0.11
SRP9P49458 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP9P49458 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP9P49458 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP9P49458 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.72■□□□□ 0.11
SRP9P49458 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP9P49458 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP9P49458 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP9P49458 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP9P49458 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.71■□□□□ 0.11
SRP9P49458 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.71■□□□□ 0.11
SRP9P49458 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.71■□□□□ 0.11
SRP9P49458 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.71■□□□□ 0.11
SRP9P49458 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
SRP9P49458 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SRP9P49458 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SRP9P49458 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SRP9P49458 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.71■□□□□ 0.11
SRP9P49458 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SRP9P49458 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 AC117947.1-201ENST00000427448 529 ntBASIC15.71■□□□□ 0.11
SRP9P49458 AC092647.4-201ENST00000457211 535 ntBASIC15.71■□□□□ 0.11
SRP9P49458 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.71■□□□□ 0.11
SRP9P49458 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.71■□□□□ 0.11
SRP9P49458 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.71■□□□□ 0.11
SRP9P49458 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
SRP9P49458 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
SRP9P49458 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP9P49458 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
SRP9P49458 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.71■□□□□ 0.1
SRP9P49458 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
SRP9P49458 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.71■□□□□ 0.1
SRP9P49458 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SRP9P49458 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
SRP9P49458 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms