Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC9A3P48764 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
SLC9A3P48764 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 AL118508.1-201ENST00000613502 2345 ntBASIC16.25■□□□□ 0.19
SLC9A3P48764 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
SLC9A3P48764 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC9A3P48764 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC9A3P48764 AL162727.3-201ENST00000635661 2787 ntBASIC16.25■□□□□ 0.19
SLC9A3P48764 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC9A3P48764 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 AC018695.7-201ENST00000624587 2492 ntBASIC16.24■□□□□ 0.19
SLC9A3P48764 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC9A3P48764 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC9A3P48764 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SLC9A3P48764 AL121761.2-201ENST00000598007 1648 ntBASIC16.24■□□□□ 0.19
SLC9A3P48764 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SLC9A3P48764 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SLC9A3P48764 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SLC9A3P48764 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC9A3P48764 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC9A3P48764 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC9A3P48764 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC9A3P48764 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.24■□□□□ 0.19
SLC9A3P48764 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC9A3P48764 AC141257.4-201ENST00000634557 245 ntBASIC16.24■□□□□ 0.19
SLC9A3P48764 AC136944.6-201ENST00000634818 245 ntBASIC16.24■□□□□ 0.19
SLC9A3P48764 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC9A3P48764 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SLC9A3P48764 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC9A3P48764 AL355312.1-201ENST00000407115 2176 ntBASIC16.24■□□□□ 0.19
SLC9A3P48764 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SLC9A3P48764 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC9A3P48764 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SLC9A3P48764 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC9A3P48764 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC9A3P48764 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC9A3P48764 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC9A3P48764 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
SLC9A3P48764 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC9A3P48764 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.23■□□□□ 0.19
SLC9A3P48764 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC9A3P48764 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC9A3P48764 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC9A3P48764 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC9A3P48764 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC9A3P48764 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC9A3P48764 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC9A3P48764 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC9A3P48764 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC9A3P48764 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC9A3P48764 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC9A3P48764 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SLC9A3P48764 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC9A3P48764 AC133963.1-201ENST00000504166 1679 ntBASIC16.23■□□□□ 0.19
SLC9A3P48764 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SLC9A3P48764 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SLC9A3P48764 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC9A3P48764 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC9A3P48764 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC9A3P48764 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SLC9A3P48764 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC9A3P48764 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLC9A3P48764 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms