Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
LHX1P48742 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LHX1P48742 AC006116.8-202ENST00000587620 1550 ntBASIC18.69■□□□□ 0.58
LHX1P48742 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LHX1P48742 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LHX1P48742 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LHX1P48742 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LHX1P48742 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LHX1P48742 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.69■□□□□ 0.58
LHX1P48742 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
LHX1P48742 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.69■□□□□ 0.58
LHX1P48742 RNA5SP419-201ENST00000515908 135 ntBASIC18.69■□□□□ 0.58
LHX1P48742 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.69■□□□□ 0.58
LHX1P48742 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.69■□□□□ 0.58
LHX1P48742 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.69■□□□□ 0.58
LHX1P48742 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LHX1P48742 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.69■□□□□ 0.58
LHX1P48742 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LHX1P48742 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.69■□□□□ 0.58
LHX1P48742 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.69■□□□□ 0.58
LHX1P48742 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LHX1P48742 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LHX1P48742 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LHX1P48742 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LHX1P48742 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LHX1P48742 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LHX1P48742 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.69■□□□□ 0.58
LHX1P48742 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.68■□□□□ 0.58
LHX1P48742 REXO1L11P-201ENST00000620964 1927 ntBASIC18.68■□□□□ 0.58
LHX1P48742 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.68■□□□□ 0.58
LHX1P48742 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX1P48742 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
LHX1P48742 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LHX1P48742 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX1P48742 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX1P48742 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX1P48742 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LHX1P48742 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX1P48742 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX1P48742 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LHX1P48742 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.68■□□□□ 0.58
LHX1P48742 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX1P48742 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LHX1P48742 BX005266.1-201ENST00000473402 457 ntBASIC18.68■□□□□ 0.58
LHX1P48742 AC093909.1-201ENST00000504731 1122 ntBASIC18.68■□□□□ 0.58
LHX1P48742 STK19B-204ENST00000512515 211 ntBASIC18.68■□□□□ 0.58
LHX1P48742 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.68■□□□□ 0.58
LHX1P48742 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.68■□□□□ 0.58
LHX1P48742 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.68■□□□□ 0.58
LHX1P48742 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LHX1P48742 AC025062.2-201ENST00000605477 670 ntBASIC18.68■□□□□ 0.58
LHX1P48742 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.68■□□□□ 0.58
LHX1P48742 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.68■□□□□ 0.58
LHX1P48742 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LHX1P48742 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LHX1P48742 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX1P48742 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.68■□□□□ 0.58
LHX1P48742 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX1P48742 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LHX1P48742 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LHX1P48742 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.67■□□□□ 0.58
LHX1P48742 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.67■□□□□ 0.58
LHX1P48742 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.67■□□□□ 0.58
LHX1P48742 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
LHX1P48742 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LHX1P48742 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 HNRNPDP1-201ENST00000439535 754 ntBASIC18.67■□□□□ 0.58
LHX1P48742 SIGLEC30P-201ENST00000455569 941 ntBASIC18.67■□□□□ 0.58
LHX1P48742 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.67■□□□□ 0.58
LHX1P48742 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.67■□□□□ 0.58
LHX1P48742 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.67■□□□□ 0.58
LHX1P48742 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.67■□□□□ 0.58
LHX1P48742 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.67■□□□□ 0.58
LHX1P48742 NOC2LP1-202ENST00000452600 2235 ntBASIC18.67■□□□□ 0.58
LHX1P48742 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.67■□□□□ 0.58
LHX1P48742 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LHX1P48742 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LHX1P48742 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.67■□□□□ 0.58
LHX1P48742 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LHX1P48742 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
LHX1P48742 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LHX1P48742 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms