Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.76■□□□□ 0.59
BRCC3P46736 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
BRCC3P46736 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.76■□□□□ 0.59
BRCC3P46736 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
BRCC3P46736 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.76■□□□□ 0.59
BRCC3P46736 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRCC3P46736 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
BRCC3P46736 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRCC3P46736 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.75■□□□□ 0.59
BRCC3P46736 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.75■□□□□ 0.59
BRCC3P46736 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRCC3P46736 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRCC3P46736 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRCC3P46736 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRCC3P46736 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRCC3P46736 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRCC3P46736 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.75■□□□□ 0.59
BRCC3P46736 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.75■□□□□ 0.59
BRCC3P46736 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
BRCC3P46736 STK19B-204ENST00000512515 211 ntBASIC18.75■□□□□ 0.59
BRCC3P46736 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.75■□□□□ 0.59
BRCC3P46736 IGHV3-52-201ENST00000519770 353 ntBASIC18.75■□□□□ 0.59
BRCC3P46736 AC006557.2-201ENST00000592985 1240 ntBASIC18.75■□□□□ 0.59
BRCC3P46736 AC140113.2-201ENST00000604370 208 ntBASIC18.75■□□□□ 0.59
BRCC3P46736 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRCC3P46736 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRCC3P46736 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRCC3P46736 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRCC3P46736 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.75■□□□□ 0.59
BRCC3P46736 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.75■□□□□ 0.59
BRCC3P46736 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
BRCC3P46736 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.75■□□□□ 0.59
BRCC3P46736 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
BRCC3P46736 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.74■□□□□ 0.59
BRCC3P46736 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.74■□□□□ 0.59
BRCC3P46736 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.74■□□□□ 0.59
BRCC3P46736 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
BRCC3P46736 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.74■□□□□ 0.59
BRCC3P46736 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.74■□□□□ 0.59
BRCC3P46736 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.74■□□□□ 0.59
BRCC3P46736 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.74■□□□□ 0.59
BRCC3P46736 SIGLEC30P-201ENST00000455569 941 ntBASIC18.74■□□□□ 0.59
BRCC3P46736 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.74■□□□□ 0.59
BRCC3P46736 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.74■□□□□ 0.59
BRCC3P46736 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.74■□□□□ 0.59
BRCC3P46736 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.74■□□□□ 0.59
BRCC3P46736 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.74■□□□□ 0.59
BRCC3P46736 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.74■□□□□ 0.59
BRCC3P46736 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
BRCC3P46736 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
BRCC3P46736 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCC3P46736 PMS2P7-201ENST00000506558 1336 ntBASIC18.74■□□□□ 0.59
BRCC3P46736 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
BRCC3P46736 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.73■□□□□ 0.59
BRCC3P46736 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.73■□□□□ 0.59
BRCC3P46736 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.73■□□□□ 0.59
BRCC3P46736 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.73■□□□□ 0.59
BRCC3P46736 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.73■□□□□ 0.59
BRCC3P46736 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
BRCC3P46736 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.73■□□□□ 0.59
BRCC3P46736 ELK2BP-201ENST00000415014 1224 ntBASIC18.73■□□□□ 0.59
BRCC3P46736 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.73■□□□□ 0.59
BRCC3P46736 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
BRCC3P46736 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.73■□□□□ 0.59
BRCC3P46736 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
BRCC3P46736 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 AL589182.2-201ENST00000619332 1049 ntBASIC18.73■□□□□ 0.59
BRCC3P46736 MIR1199-201ENST00000621445 119 ntBASIC18.73■□□□□ 0.59
BRCC3P46736 AC004706.3-202ENST00000621574 984 ntBASIC18.73■□□□□ 0.59
BRCC3P46736 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.73■□□□□ 0.59
BRCC3P46736 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.73■□□□□ 0.59
BRCC3P46736 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.73■□□□□ 0.59
BRCC3P46736 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms