Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.36■□□□□ 0.21
HTR3AP46098 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.36■□□□□ 0.21
HTR3AP46098 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.36■□□□□ 0.21
HTR3AP46098 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.36■□□□□ 0.21
HTR3AP46098 AL049597.2-201ENST00000565575 961 ntBASIC16.36■□□□□ 0.21
HTR3AP46098 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
HTR3AP46098 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.36■□□□□ 0.21
HTR3AP46098 GPR32P1-201ENST00000601788 811 ntBASIC16.36■□□□□ 0.21
HTR3AP46098 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
HTR3AP46098 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HTR3AP46098 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HTR3AP46098 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.36■□□□□ 0.21
HTR3AP46098 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.36■□□□□ 0.21
HTR3AP46098 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HTR3AP46098 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
HTR3AP46098 MST1L-201ENST00000442552 2185 ntBASIC16.36■□□□□ 0.21
HTR3AP46098 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HTR3AP46098 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HTR3AP46098 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HTR3AP46098 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.35■□□□□ 0.21
HTR3AP46098 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.35■□□□□ 0.21
HTR3AP46098 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.35■□□□□ 0.21
HTR3AP46098 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.35■□□□□ 0.21
HTR3AP46098 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.35■□□□□ 0.21
HTR3AP46098 TSPY12P-201ENST00000421279 868 ntBASIC16.35■□□□□ 0.21
HTR3AP46098 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.35■□□□□ 0.21
HTR3AP46098 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.35■□□□□ 0.21
HTR3AP46098 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.35■□□□□ 0.21
HTR3AP46098 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.35■□□□□ 0.21
HTR3AP46098 AC116407.2-201ENST00000613639 860 ntBASIC16.35■□□□□ 0.21
HTR3AP46098 AC004263.2-201ENST00000617183 678 ntBASIC16.35■□□□□ 0.21
HTR3AP46098 AC009154.2-201ENST00000621177 724 ntBASIC16.35■□□□□ 0.21
HTR3AP46098 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
HTR3AP46098 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
HTR3AP46098 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HTR3AP46098 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.35■□□□□ 0.21
HTR3AP46098 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HTR3AP46098 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
HTR3AP46098 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.35■□□□□ 0.21
HTR3AP46098 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HTR3AP46098 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HTR3AP46098 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR3AP46098 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR3AP46098 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HTR3AP46098 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.34■□□□□ 0.21
HTR3AP46098 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR3AP46098 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.34■□□□□ 0.21
HTR3AP46098 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR3AP46098 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
HTR3AP46098 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR3AP46098 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR3AP46098 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR3AP46098 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR3AP46098 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR3AP46098 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.34■□□□□ 0.21
HTR3AP46098 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.34■□□□□ 0.21
HTR3AP46098 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.34■□□□□ 0.21
HTR3AP46098 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.34■□□□□ 0.21
HTR3AP46098 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.34■□□□□ 0.21
HTR3AP46098 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.34■□□□□ 0.21
HTR3AP46098 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.34■□□□□ 0.21
HTR3AP46098 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.34■□□□□ 0.21
HTR3AP46098 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.34■□□□□ 0.21
HTR3AP46098 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.34■□□□□ 0.21
HTR3AP46098 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.34■□□□□ 0.21
HTR3AP46098 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR3AP46098 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.34■□□□□ 0.21
HTR3AP46098 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.34■□□□□ 0.21
HTR3AP46098 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms