Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SLC1A2P43004 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC1A2P43004 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC1A2P43004 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC1A2P43004 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SLC1A2P43004 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC1A2P43004 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
SLC1A2P43004 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SLC1A2P43004 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC1A2P43004 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC1A2P43004 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SLC1A2P43004 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A2P43004 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A2P43004 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SLC1A2P43004 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A2P43004 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A2P43004 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SLC1A2P43004 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SLC1A2P43004 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A2P43004 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
SLC1A2P43004 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC1A2P43004 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC1A2P43004 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC1A2P43004 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A2P43004 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC1A2P43004 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A2P43004 GUSBP12-201ENST00000513727 720 ntBASIC17.6■□□□□ 0.41
SLC1A2P43004 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
SLC1A2P43004 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC1A2P43004 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC1A2P43004 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.6■□□□□ 0.41
SLC1A2P43004 AL592071.1-201ENST00000611956 408 ntBASIC17.6■□□□□ 0.41
SLC1A2P43004 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A2P43004 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A2P43004 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A2P43004 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A2P43004 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A2P43004 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A2P43004 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A2P43004 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SLC1A2P43004 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A2P43004 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC1A2P43004 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 PCDHA12-202ENST00000613593 2588 ntBASIC17.59■□□□□ 0.41
SLC1A2P43004 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
SLC1A2P43004 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A2P43004 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A2P43004 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC1A2P43004 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SLC1A2P43004 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A2P43004 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A2P43004 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.59■□□□□ 0.41
SLC1A2P43004 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A2P43004 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
SLC1A2P43004 KRT18P21-201ENST00000515767 1272 ntBASIC17.59■□□□□ 0.41
SLC1A2P43004 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 AL136038.3-201ENST00000561909 1096 ntBASIC17.59■□□□□ 0.41
SLC1A2P43004 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC1A2P43004 AC011498.5-201ENST00000592027 486 ntBASIC17.59■□□□□ 0.41
SLC1A2P43004 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A2P43004 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A2P43004 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A2P43004 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC1A2P43004 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms