Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.63■■□□□ 1.05
PDE6BP35913 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6BP35913 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6BP35913 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6BP35913 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.63■■□□□ 1.05
PDE6BP35913 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6BP35913 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6BP35913 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PDE6BP35913 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6BP35913 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6BP35913 AL590787.1-201ENST00000568856 1315 ntBASIC21.62■■□□□ 1.05
PDE6BP35913 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6BP35913 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.62■■□□□ 1.05
PDE6BP35913 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.62■■□□□ 1.05
PDE6BP35913 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PDE6BP35913 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6BP35913 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6BP35913 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6BP35913 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6BP35913 ACTG1P4-201ENST00000425123 1122 ntBASIC21.62■■□□□ 1.05
PDE6BP35913 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.62■■□□□ 1.05
PDE6BP35913 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.62■■□□□ 1.05
PDE6BP35913 AC015911.4-201ENST00000588022 1070 ntBASIC21.62■■□□□ 1.05
PDE6BP35913 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.62■■□□□ 1.05
PDE6BP35913 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.62■■□□□ 1.05
PDE6BP35913 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6BP35913 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6BP35913 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6BP35913 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6BP35913 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.62■■□□□ 1.05
PDE6BP35913 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.62■■□□□ 1.05
PDE6BP35913 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6BP35913 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.61■■□□□ 1.05
PDE6BP35913 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6BP35913 AL096828.2-201ENST00000567259 1965 ntBASIC21.61■■□□□ 1.05
PDE6BP35913 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.61■■□□□ 1.05
PDE6BP35913 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.61■■□□□ 1.05
PDE6BP35913 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6BP35913 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6BP35913 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6BP35913 AL513480.1-201ENST00000451731 511 ntBASIC21.61■■□□□ 1.05
PDE6BP35913 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
PDE6BP35913 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.61■■□□□ 1.05
PDE6BP35913 RNA5SP421-201ENST00000516864 134 ntBASIC21.61■■□□□ 1.05
PDE6BP35913 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.61■■□□□ 1.05
PDE6BP35913 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6BP35913 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.61■■□□□ 1.05
PDE6BP35913 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.61■■□□□ 1.05
PDE6BP35913 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.61■■□□□ 1.05
PDE6BP35913 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.61■■□□□ 1.05
PDE6BP35913 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
PDE6BP35913 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6BP35913 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6BP35913 AC092919.2-201ENST00000623631 1645 ntBASIC21.61■■□□□ 1.05
PDE6BP35913 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6BP35913 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6BP35913 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6BP35913 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PDE6BP35913 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6BP35913 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.61■■□□□ 1.05
PDE6BP35913 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.61■■□□□ 1.05
PDE6BP35913 AC009949.1-201ENST00000623048 1830 ntBASIC21.6■■□□□ 1.05
PDE6BP35913 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE6BP35913 AC100803.2-201ENST00000562459 1963 ntBASIC21.6■■□□□ 1.05
PDE6BP35913 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.6■■□□□ 1.05
PDE6BP35913 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE6BP35913 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDE6BP35913 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
PDE6BP35913 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.6■■□□□ 1.05
PDE6BP35913 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.6■■□□□ 1.05
PDE6BP35913 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.6■■□□□ 1.05
PDE6BP35913 AC067863.1-201ENST00000494933 530 ntBASIC21.6■■□□□ 1.05
PDE6BP35913 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDE6BP35913 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDE6BP35913 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
PDE6BP35913 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDE6BP35913 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.6■■□□□ 1.05
PDE6BP35913 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.6■■□□□ 1.05
PDE6BP35913 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE6BP35913 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE6BP35913 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.6■■□□□ 1.05
PDE6BP35913 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE6BP35913 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.6■■□□□ 1.05
PDE6BP35913 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.6■■□□□ 1.05
PDE6BP35913 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE6BP35913 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDE6BP35913 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE6BP35913 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.59■■□□□ 1.05
PDE6BP35913 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE6BP35913 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE6BP35913 ADH5P3-201ENST00000433842 1137 ntBASIC21.59■■□□□ 1.05
PDE6BP35913 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.59■■□□□ 1.05
PDE6BP35913 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.59■■□□□ 1.05
PDE6BP35913 AC190387.1-201ENST00000551683 408 ntBASIC21.59■■□□□ 1.05
PDE6BP35913 AC093520.2-201ENST00000561830 333 ntBASIC21.59■■□□□ 1.05
PDE6BP35913 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.59■■□□□ 1.05
PDE6BP35913 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDE6BP35913 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.59■■□□□ 1.05
PDE6BP35913 AJ011932.1-201ENST00000621707 465 ntBASIC21.59■■□□□ 1.05
PDE6BP35913 AC009093.7-201ENST00000623853 1223 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms