Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT20P35900 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.84■□□□□ 0.29
KRT20P35900 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT20P35900 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT20P35900 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT20P35900 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT20P35900 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT20P35900 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT20P35900 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT20P35900 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT20P35900 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.84■□□□□ 0.29
KRT20P35900 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT20P35900 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT20P35900 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT20P35900 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KRT20P35900 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT20P35900 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT20P35900 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KRT20P35900 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT20P35900 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
KRT20P35900 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT20P35900 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT20P35900 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KRT20P35900 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KRT20P35900 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT20P35900 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KRT20P35900 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KRT20P35900 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KRT20P35900 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT20P35900 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KRT20P35900 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT20P35900 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT20P35900 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT20P35900 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT20P35900 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT20P35900 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
KRT20P35900 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT20P35900 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
KRT20P35900 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT20P35900 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.83■□□□□ 0.28
KRT20P35900 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.83■□□□□ 0.28
KRT20P35900 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT20P35900 AC092597.1-201ENST00000487352 616 ntBASIC16.83■□□□□ 0.28
KRT20P35900 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT20P35900 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT20P35900 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT20P35900 AC087388.1-201ENST00000571370 1112 ntBASIC16.83■□□□□ 0.28
KRT20P35900 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT20P35900 NTF6B-201ENST00000591913 560 ntBASIC16.83■□□□□ 0.28
KRT20P35900 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT20P35900 AC141586.5-201ENST00000624546 2050 ntBASIC16.83■□□□□ 0.28
KRT20P35900 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
KRT20P35900 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT20P35900 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.83■□□□□ 0.28
KRT20P35900 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT20P35900 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT20P35900 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KRT20P35900 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT20P35900 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT20P35900 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT20P35900 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT20P35900 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KRT20P35900 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
KRT20P35900 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT20P35900 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT20P35900 HBZP1-201ENST00000354915 429 ntBASIC16.82■□□□□ 0.28
KRT20P35900 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT20P35900 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT20P35900 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT20P35900 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT20P35900 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.82■□□□□ 0.28
KRT20P35900 AC079602.3-201ENST00000623931 403 ntBASIC16.82■□□□□ 0.28
KRT20P35900 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT20P35900 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT20P35900 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT20P35900 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT20P35900 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
KRT20P35900 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT20P35900 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT20P35900 AL139384.1-201ENST00000612143 3047 ntBASIC16.82■□□□□ 0.28
KRT20P35900 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT20P35900 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT20P35900 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT20P35900 AL024508.2-201ENST00000607749 1894 ntBASIC16.82■□□□□ 0.28
KRT20P35900 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KRT20P35900 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT20P35900 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms