Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PCK1P35558 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.64■□□□□ 0.57
PCK1P35558 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.64■□□□□ 0.57
PCK1P35558 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCK1P35558 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.63■□□□□ 0.57
PCK1P35558 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.63■□□□□ 0.57
PCK1P35558 Z83836.1-201ENST00000624605 1642 ntBASIC18.63■□□□□ 0.57
PCK1P35558 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PCK1P35558 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.63■□□□□ 0.57
PCK1P35558 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.63■□□□□ 0.57
PCK1P35558 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.63■□□□□ 0.57
PCK1P35558 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.63■□□□□ 0.57
PCK1P35558 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.63■□□□□ 0.57
PCK1P35558 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 MTCL1P1-201ENST00000446207 792 ntBASIC18.63■□□□□ 0.57
PCK1P35558 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.63■□□□□ 0.57
PCK1P35558 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.63■□□□□ 0.57
PCK1P35558 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.63■□□□□ 0.57
PCK1P35558 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCK1P35558 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.63■□□□□ 0.57
PCK1P35558 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.62■□□□□ 0.57
PCK1P35558 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCK1P35558 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.62■□□□□ 0.57
PCK1P35558 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCK1P35558 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCK1P35558 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCK1P35558 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCK1P35558 AL645929.1-201ENST00000420084 975 ntBASIC18.62■□□□□ 0.57
PCK1P35558 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.62■□□□□ 0.57
PCK1P35558 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCK1P35558 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCK1P35558 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.62■□□□□ 0.57
PCK1P35558 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCK1P35558 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCK1P35558 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.62■□□□□ 0.57
PCK1P35558 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.62■□□□□ 0.57
PCK1P35558 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCK1P35558 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCK1P35558 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.62■□□□□ 0.57
PCK1P35558 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
PCK1P35558 AL355312.1-201ENST00000407115 2176 ntBASIC18.62■□□□□ 0.57
PCK1P35558 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCK1P35558 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
PCK1P35558 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
PCK1P35558 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCK1P35558 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCK1P35558 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCK1P35558 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.61■□□□□ 0.57
PCK1P35558 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCK1P35558 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PCK1P35558 AC124067.4-201ENST00000519691 2379 ntBASIC18.61■□□□□ 0.57
PCK1P35558 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCK1P35558 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.61■□□□□ 0.57
PCK1P35558 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCK1P35558 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCK1P35558 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
PCK1P35558 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCK1P35558 AC133963.1-201ENST00000504166 1679 ntBASIC18.61■□□□□ 0.57
PCK1P35558 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCK1P35558 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.61■□□□□ 0.57
PCK1P35558 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCK1P35558 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCK1P35558 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.61■□□□□ 0.57
PCK1P35558 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.61■□□□□ 0.57
PCK1P35558 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.61■□□□□ 0.57
PCK1P35558 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.61■□□□□ 0.57
PCK1P35558 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.61■□□□□ 0.57
PCK1P35558 AL136038.3-201ENST00000561909 1096 ntBASIC18.61■□□□□ 0.57
PCK1P35558 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.61■□□□□ 0.57
PCK1P35558 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.61■□□□□ 0.57
PCK1P35558 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCK1P35558 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCK1P35558 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.61■□□□□ 0.57
PCK1P35558 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCK1P35558 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
PCK1P35558 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCK1P35558 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
PCK1P35558 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.61■□□□□ 0.57
PCK1P35558 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCK1P35558 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCK1P35558 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.6■□□□□ 0.57
PCK1P35558 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCK1P35558 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.6■□□□□ 0.57
PCK1P35558 KRT18P21-201ENST00000515767 1272 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms