Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 LINC01238-205ENST00000567549 1107 ntBASIC16.82■□□□□ 0.28
GPC1P35052 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC1P35052 RN7SL850P-201ENST00000579959 291 ntBASIC16.82■□□□□ 0.28
GPC1P35052 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.82■□□□□ 0.28
GPC1P35052 AC009154.2-201ENST00000621177 724 ntBASIC16.82■□□□□ 0.28
GPC1P35052 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.82■□□□□ 0.28
GPC1P35052 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
GPC1P35052 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC1P35052 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
GPC1P35052 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.82■□□□□ 0.28
GPC1P35052 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC1P35052 FER1L4-210ENST00000615531 5998 ntBASIC16.82■□□□□ 0.28
GPC1P35052 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
GPC1P35052 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC1P35052 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GPC1P35052 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC1P35052 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
GPC1P35052 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC1P35052 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.82■□□□□ 0.28
GPC1P35052 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC1P35052 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GPC1P35052 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
GPC1P35052 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 IGHGP-201ENST00000390555 1178 ntBASIC16.81■□□□□ 0.28
GPC1P35052 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.81■□□□□ 0.28
GPC1P35052 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.81■□□□□ 0.28
GPC1P35052 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.81■□□□□ 0.28
GPC1P35052 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.81■□□□□ 0.28
GPC1P35052 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.81■□□□□ 0.28
GPC1P35052 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.81■□□□□ 0.28
GPC1P35052 GPR32P1-201ENST00000601788 811 ntBASIC16.81■□□□□ 0.28
GPC1P35052 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.81■□□□□ 0.28
GPC1P35052 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.81■□□□□ 0.28
GPC1P35052 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.81■□□□□ 0.28
GPC1P35052 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC1P35052 AL355312.1-201ENST00000407115 2176 ntBASIC16.81■□□□□ 0.28
GPC1P35052 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.81■□□□□ 0.28
GPC1P35052 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.81■□□□□ 0.28
GPC1P35052 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GPC1P35052 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC1P35052 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC1P35052 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.8■□□□□ 0.28
GPC1P35052 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC1P35052 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC1P35052 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
GPC1P35052 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
GPC1P35052 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC1P35052 AL353692.3-201ENST00000407031 1396 ntBASIC16.8■□□□□ 0.28
GPC1P35052 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC1P35052 AC009949.1-201ENST00000623048 1830 ntBASIC16.8■□□□□ 0.28
GPC1P35052 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC1P35052 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
GPC1P35052 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC1P35052 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC1P35052 MIR662-201ENST00000384847 95 ntBASIC16.8■□□□□ 0.28
GPC1P35052 TMPOP1-202ENST00000424642 1267 ntBASIC16.8■□□□□ 0.28
GPC1P35052 VENTXP5-201ENST00000523979 775 ntBASIC16.8■□□□□ 0.28
GPC1P35052 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.8■□□□□ 0.28
GPC1P35052 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC1P35052 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
GPC1P35052 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC1P35052 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC1P35052 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.8■□□□□ 0.28
GPC1P35052 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC1P35052 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC1P35052 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC1P35052 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC1P35052 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC1P35052 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC1P35052 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
GPC1P35052 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC1P35052 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC1P35052 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
GPC1P35052 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GPC1P35052 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC1P35052 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GPC1P35052 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.79■□□□□ 0.28
GPC1P35052 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GPC1P35052 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC1P35052 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC1P35052 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms