Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CTGFP29279 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.75■□□□□ 0.75
CTGFP29279 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTGFP29279 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.75■□□□□ 0.75
CTGFP29279 FO538757.1-201ENST00000623083 1397 ntBASIC19.75■□□□□ 0.75
CTGFP29279 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTGFP29279 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CTGFP29279 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CTGFP29279 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.75■□□□□ 0.75
CTGFP29279 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.75■□□□□ 0.75
CTGFP29279 LINC02560-201ENST00000596379 459 ntBASIC19.75■□□□□ 0.75
CTGFP29279 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTGFP29279 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTGFP29279 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CTGFP29279 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTGFP29279 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.75■□□□□ 0.75
CTGFP29279 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTGFP29279 AL031598.1-201ENST00000561511 1773 ntBASIC19.75■□□□□ 0.75
CTGFP29279 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.75■□□□□ 0.75
CTGFP29279 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTGFP29279 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTGFP29279 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.74■□□□□ 0.75
CTGFP29279 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTGFP29279 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTGFP29279 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTGFP29279 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CTGFP29279 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.74■□□□□ 0.75
CTGFP29279 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CTGFP29279 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.74■□□□□ 0.75
CTGFP29279 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTGFP29279 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.74■□□□□ 0.75
CTGFP29279 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTGFP29279 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.74■□□□□ 0.75
CTGFP29279 ACTG1P4-201ENST00000425123 1122 ntBASIC19.74■□□□□ 0.75
CTGFP29279 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.74■□□□□ 0.75
CTGFP29279 KLF2P3-201ENST00000451977 1087 ntBASIC19.74■□□□□ 0.75
CTGFP29279 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CTGFP29279 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.74■□□□□ 0.75
CTGFP29279 AP001059.3-201ENST00000619053 235 ntBASIC19.74■□□□□ 0.75
CTGFP29279 AC008761.3-201ENST00000624803 892 ntBASIC19.74■□□□□ 0.75
CTGFP29279 BX276092.7-203ENST00000637198 1536 ntBASIC19.74■□□□□ 0.75
CTGFP29279 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTGFP29279 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTGFP29279 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.74■□□□□ 0.75
CTGFP29279 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTGFP29279 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTGFP29279 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTGFP29279 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.73■□□□□ 0.75
CTGFP29279 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTGFP29279 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.73■□□□□ 0.75
CTGFP29279 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTGFP29279 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CTGFP29279 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTGFP29279 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTGFP29279 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTGFP29279 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTGFP29279 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.73■□□□□ 0.75
CTGFP29279 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTGFP29279 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTGFP29279 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTGFP29279 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
CTGFP29279 AC140658.5-201ENST00000438532 169 ntBASIC19.73■□□□□ 0.75
CTGFP29279 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.73■□□□□ 0.75
CTGFP29279 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.73■□□□□ 0.75
CTGFP29279 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTGFP29279 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTGFP29279 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTGFP29279 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.73■□□□□ 0.75
CTGFP29279 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CTGFP29279 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTGFP29279 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.73■□□□□ 0.75
CTGFP29279 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CTGFP29279 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.73■□□□□ 0.75
CTGFP29279 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.73■□□□□ 0.75
CTGFP29279 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.73■□□□□ 0.75
CTGFP29279 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CTGFP29279 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.72■□□□□ 0.75
CTGFP29279 TREML5P-201ENST00000421694 576 ntBASIC19.72■□□□□ 0.75
CTGFP29279 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.72■□□□□ 0.75
CTGFP29279 KRT18P32-201ENST00000424695 1287 ntBASIC19.72■□□□□ 0.75
CTGFP29279 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.72■□□□□ 0.75
CTGFP29279 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CTGFP29279 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.72■□□□□ 0.75
CTGFP29279 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.72■□□□□ 0.75
CTGFP29279 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.72■□□□□ 0.75
CTGFP29279 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CTGFP29279 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms