Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.03■□□□□ 0.16
GDF1P27539 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.03■□□□□ 0.16
GDF1P27539 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.03■□□□□ 0.16
GDF1P27539 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.03■□□□□ 0.16
GDF1P27539 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.03■□□□□ 0.16
GDF1P27539 AL356309.3-201ENST00000624132 1934 ntBASIC16.03■□□□□ 0.16
GDF1P27539 KRT18P55-202ENST00000578578 1546 ntBASIC16.03■□□□□ 0.16
GDF1P27539 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.03■□□□□ 0.16
GDF1P27539 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.03■□□□□ 0.16
GDF1P27539 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
GDF1P27539 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
GDF1P27539 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
GDF1P27539 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GDF1P27539 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GDF1P27539 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GDF1P27539 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.02■□□□□ 0.16
GDF1P27539 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GDF1P27539 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.02■□□□□ 0.16
GDF1P27539 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GDF1P27539 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.02■□□□□ 0.16
GDF1P27539 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GDF1P27539 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.02■□□□□ 0.16
GDF1P27539 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GDF1P27539 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GDF1P27539 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
GDF1P27539 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.02■□□□□ 0.16
GDF1P27539 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.02■□□□□ 0.16
GDF1P27539 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.02■□□□□ 0.16
GDF1P27539 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.02■□□□□ 0.16
GDF1P27539 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
GDF1P27539 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.02■□□□□ 0.16
GDF1P27539 AL139288.1-201ENST00000623748 933 ntBASIC16.02■□□□□ 0.16
GDF1P27539 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
GDF1P27539 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.02■□□□□ 0.15
GDF1P27539 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.02■□□□□ 0.15
GDF1P27539 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.02■□□□□ 0.15
GDF1P27539 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GDF1P27539 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GDF1P27539 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GDF1P27539 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
GDF1P27539 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GDF1P27539 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.02■□□□□ 0.15
GDF1P27539 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
GDF1P27539 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
GDF1P27539 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.15
GDF1P27539 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.02■□□□□ 0.15
GDF1P27539 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GDF1P27539 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.02■□□□□ 0.15
GDF1P27539 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
GDF1P27539 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.01■□□□□ 0.15
GDF1P27539 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
GDF1P27539 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
GDF1P27539 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.01■□□□□ 0.15
GDF1P27539 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.01■□□□□ 0.15
GDF1P27539 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
GDF1P27539 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
GDF1P27539 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.01■□□□□ 0.15
GDF1P27539 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.01■□□□□ 0.15
GDF1P27539 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.01■□□□□ 0.15
GDF1P27539 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.01■□□□□ 0.15
GDF1P27539 AP001005.1-201ENST00000571755 1248 ntBASIC16.01■□□□□ 0.15
GDF1P27539 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.01■□□□□ 0.15
GDF1P27539 AP000867.4-201ENST00000641616 219 ntBASIC16.01■□□□□ 0.15
GDF1P27539 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.01■□□□□ 0.15
GDF1P27539 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
GDF1P27539 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
GDF1P27539 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.01■□□□□ 0.15
GDF1P27539 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
GDF1P27539 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
GDF1P27539 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16■□□□□ 0.15
GDF1P27539 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16■□□□□ 0.15
GDF1P27539 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms