Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.5■■□□□ 1.03
KCNA3P22001 SLC25A39P2-201ENST00000537614 270 ntBASIC21.5■■□□□ 1.03
KCNA3P22001 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.5■■□□□ 1.03
KCNA3P22001 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.5■■□□□ 1.03
KCNA3P22001 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNA3P22001 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.5■■□□□ 1.03
KCNA3P22001 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNA3P22001 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.5■■□□□ 1.03
KCNA3P22001 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
KCNA3P22001 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 OR8S1-201ENST00000310194 1080 ntBASIC21.49■■□□□ 1.03
KCNA3P22001 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 TREML5P-201ENST00000421694 576 ntBASIC21.49■■□□□ 1.03
KCNA3P22001 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.49■■□□□ 1.03
KCNA3P22001 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.49■■□□□ 1.03
KCNA3P22001 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.49■■□□□ 1.03
KCNA3P22001 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.49■■□□□ 1.03
KCNA3P22001 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.49■■□□□ 1.03
KCNA3P22001 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.49■■□□□ 1.03
KCNA3P22001 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.49■■□□□ 1.03
KCNA3P22001 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.49■■□□□ 1.03
KCNA3P22001 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
KCNA3P22001 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNA3P22001 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KCNA3P22001 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.48■■□□□ 1.03
KCNA3P22001 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
KCNA3P22001 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNA3P22001 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNA3P22001 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
KCNA3P22001 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNA3P22001 AC107890.1-201ENST00000422478 521 ntBASIC21.48■■□□□ 1.03
KCNA3P22001 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
KCNA3P22001 AC140658.5-201ENST00000438532 169 ntBASIC21.48■■□□□ 1.03
KCNA3P22001 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.48■■□□□ 1.03
KCNA3P22001 CRB3P1-201ENST00000449338 276 ntBASIC21.48■■□□□ 1.03
KCNA3P22001 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.48■■□□□ 1.03
KCNA3P22001 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.48■■□□□ 1.03
KCNA3P22001 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.48■■□□□ 1.03
KCNA3P22001 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
KCNA3P22001 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.48■■□□□ 1.03
KCNA3P22001 CR383656.12-201ENST00000549567 513 ntBASIC21.48■■□□□ 1.03
KCNA3P22001 COX11-202ENST00000571584 1108 ntTSL 2 BASIC21.48■■□□□ 1.03
KCNA3P22001 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNA3P22001 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KCNA3P22001 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
KCNA3P22001 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KCNA3P22001 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNA3P22001 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNA3P22001 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNA3P22001 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.48■■□□□ 1.03
KCNA3P22001 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
KCNA3P22001 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.48■■□□□ 1.03
KCNA3P22001 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.48■■□□□ 1.03
KCNA3P22001 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNA3P22001 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNA3P22001 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.47■■□□□ 1.03
KCNA3P22001 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.47■■□□□ 1.03
KCNA3P22001 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.47■■□□□ 1.03
KCNA3P22001 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.47■■□□□ 1.03
KCNA3P22001 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.47■■□□□ 1.03
KCNA3P22001 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNA3P22001 AC140878.1-201ENST00000565277 250 ntBASIC21.47■■□□□ 1.03
KCNA3P22001 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KCNA3P22001 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.47■■□□□ 1.03
KCNA3P22001 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
KCNA3P22001 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNA3P22001 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.47■■□□□ 1.03
KCNA3P22001 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.47■■□□□ 1.03
KCNA3P22001 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNA3P22001 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KCNA3P22001 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KCNA3P22001 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.46■■□□□ 1.03
KCNA3P22001 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
KCNA3P22001 AC008677.1-201ENST00000519230 1561 ntBASIC21.46■■□□□ 1.03
KCNA3P22001 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
KCNA3P22001 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.46■■□□□ 1.03
KCNA3P22001 KRT18P32-201ENST00000424695 1287 ntBASIC21.46■■□□□ 1.03
KCNA3P22001 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.46■■□□□ 1.03
KCNA3P22001 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.46■■□□□ 1.03
KCNA3P22001 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
KCNA3P22001 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.46■■□□□ 1.03
KCNA3P22001 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.46■■□□□ 1.03
KCNA3P22001 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KCNA3P22001 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.46■■□□□ 1.03
KCNA3P22001 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KCNA3P22001 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KCNA3P22001 AC005332.7-201ENST00000614046 2005 ntBASIC21.46■■□□□ 1.03
KCNA3P22001 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms