Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NFKB1P19838 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NFKB1P19838 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NFKB1P19838 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NFKB1P19838 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NFKB1P19838 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NFKB1P19838 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.98■□□□□ 0.47
NFKB1P19838 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NFKB1P19838 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 LTB4R2-202ENST00000528054 3092 ntBASIC17.98■□□□□ 0.47
NFKB1P19838 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NFKB1P19838 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
NFKB1P19838 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.98■□□□□ 0.47
NFKB1P19838 AC007967.3-201ENST00000434308 558 ntBASIC17.98■□□□□ 0.47
NFKB1P19838 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.98■□□□□ 0.47
NFKB1P19838 AL138831.2-201ENST00000606564 490 ntBASIC17.98■□□□□ 0.47
NFKB1P19838 AL358472.4-201ENST00000633140 710 ntBASIC17.98■□□□□ 0.47
NFKB1P19838 AP000550.4-202ENST00000639755 178 ntBASIC17.98■□□□□ 0.47
NFKB1P19838 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NFKB1P19838 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.98■□□□□ 0.47
NFKB1P19838 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.98■□□□□ 0.47
NFKB1P19838 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NFKB1P19838 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
NFKB1P19838 KRT18P1-202ENST00000452408 1331 ntBASIC17.98■□□□□ 0.47
NFKB1P19838 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.97■□□□□ 0.47
NFKB1P19838 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.97■□□□□ 0.47
NFKB1P19838 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.97■□□□□ 0.47
NFKB1P19838 OR6D1P-202ENST00000641007 5290 ntBASIC17.97■□□□□ 0.47
NFKB1P19838 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
NFKB1P19838 AC005104.2-201ENST00000427818 678 ntBASIC17.97■□□□□ 0.47
NFKB1P19838 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.97■□□□□ 0.47
NFKB1P19838 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.97■□□□□ 0.47
NFKB1P19838 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.97■□□□□ 0.47
NFKB1P19838 AP005901.3-202ENST00000581653 237 ntBASIC17.97■□□□□ 0.47
NFKB1P19838 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.97■□□□□ 0.47
NFKB1P19838 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NFKB1P19838 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.97■□□□□ 0.47
NFKB1P19838 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.97■□□□□ 0.47
NFKB1P19838 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.97■□□□□ 0.47
NFKB1P19838 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NFKB1P19838 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NFKB1P19838 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NFKB1P19838 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NFKB1P19838 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.96■□□□□ 0.47
NFKB1P19838 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NFKB1P19838 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.96■□□□□ 0.47
NFKB1P19838 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.96■□□□□ 0.47
NFKB1P19838 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NFKB1P19838 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NFKB1P19838 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.96■□□□□ 0.47
NFKB1P19838 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NFKB1P19838 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NFKB1P19838 ARMC10P1-201ENST00000313754 855 ntBASIC17.96■□□□□ 0.47
NFKB1P19838 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NFKB1P19838 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.96■□□□□ 0.47
NFKB1P19838 COX5BP2-201ENST00000392354 334 ntBASIC17.96■□□□□ 0.47
NFKB1P19838 MIR1224-201ENST00000408193 85 ntBASIC17.96■□□□□ 0.47
NFKB1P19838 AP002383.4-201ENST00000442518 975 ntBASIC17.96■□□□□ 0.47
NFKB1P19838 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.96■□□□□ 0.47
NFKB1P19838 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.96■□□□□ 0.47
NFKB1P19838 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.96■□□□□ 0.47
NFKB1P19838 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NFKB1P19838 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NFKB1P19838 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NFKB1P19838 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NFKB1P19838 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.96■□□□□ 0.47
NFKB1P19838 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.96■□□□□ 0.47
NFKB1P19838 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
NFKB1P19838 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NFKB1P19838 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms