Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT4P19013 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT4P19013 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT4P19013 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.76■□□□□ 0.43
KRT4P19013 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT4P19013 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT4P19013 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
KRT4P19013 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
KRT4P19013 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
KRT4P19013 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
KRT4P19013 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT4P19013 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
KRT4P19013 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.75■□□□□ 0.43
KRT4P19013 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
KRT4P19013 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT4P19013 AC024243.1-201ENST00000609234 778 ntBASIC17.75■□□□□ 0.43
KRT4P19013 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
KRT4P19013 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
KRT4P19013 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT4P19013 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KRT4P19013 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT4P19013 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT4P19013 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KRT4P19013 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
KRT4P19013 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.74■□□□□ 0.43
KRT4P19013 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT4P19013 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT4P19013 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT4P19013 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT4P19013 UNC93B2-201ENST00000285383 730 ntBASIC17.74■□□□□ 0.43
KRT4P19013 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT4P19013 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
KRT4P19013 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT4P19013 AP003071.4-201ENST00000562276 1284 ntBASIC17.74■□□□□ 0.43
KRT4P19013 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KRT4P19013 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT4P19013 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT4P19013 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT4P19013 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
KRT4P19013 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
KRT4P19013 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KRT4P19013 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT4P19013 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT4P19013 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT4P19013 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT4P19013 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT4P19013 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT4P19013 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT4P19013 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.73■□□□□ 0.43
KRT4P19013 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KRT4P19013 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT4P19013 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT4P19013 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
KRT4P19013 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT4P19013 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
KRT4P19013 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.73■□□□□ 0.43
KRT4P19013 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT4P19013 ITM2C-210ENST00000620962 501 ntBASIC17.73■□□□□ 0.43
KRT4P19013 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
KRT4P19013 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT4P19013 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT4P19013 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
KRT4P19013 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KRT4P19013 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT4P19013 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
KRT4P19013 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT4P19013 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT4P19013 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT4P19013 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT4P19013 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
KRT4P19013 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT4P19013 AC016396.2-201ENST00000562575 1417 ntBASIC17.72■□□□□ 0.43
KRT4P19013 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT4P19013 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms