Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 BX276092.7-203ENST00000637198 1536 ntBASIC17.77■□□□□ 0.44
CTPS1P17812 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS1P17812 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS1P17812 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CTPS1P17812 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.77■□□□□ 0.44
CTPS1P17812 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS1P17812 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS1P17812 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS1P17812 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CTPS1P17812 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS1P17812 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CTPS1P17812 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
CTPS1P17812 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CTPS1P17812 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.77■□□□□ 0.44
CTPS1P17812 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CTPS1P17812 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.77■□□□□ 0.44
CTPS1P17812 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.77■□□□□ 0.44
CTPS1P17812 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.77■□□□□ 0.44
CTPS1P17812 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.77■□□□□ 0.44
CTPS1P17812 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.77■□□□□ 0.44
CTPS1P17812 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.77■□□□□ 0.44
CTPS1P17812 IFNL4P1-201ENST00000607083 540 ntBASIC17.77■□□□□ 0.44
CTPS1P17812 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS1P17812 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CTPS1P17812 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS1P17812 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS1P17812 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CTPS1P17812 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTPS1P17812 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.77■□□□□ 0.43
CTPS1P17812 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.77■□□□□ 0.43
CTPS1P17812 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CTPS1P17812 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.77■□□□□ 0.43
CTPS1P17812 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTPS1P17812 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CTPS1P17812 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.76■□□□□ 0.43
CTPS1P17812 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTPS1P17812 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.76■□□□□ 0.43
CTPS1P17812 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS1P17812 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.76■□□□□ 0.43
CTPS1P17812 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS1P17812 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS1P17812 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS1P17812 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
CTPS1P17812 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.76■□□□□ 0.43
CTPS1P17812 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS1P17812 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS1P17812 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS1P17812 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS1P17812 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.76■□□□□ 0.43
CTPS1P17812 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS1P17812 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
CTPS1P17812 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.76■□□□□ 0.43
CTPS1P17812 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.76■□□□□ 0.43
CTPS1P17812 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.76■□□□□ 0.43
CTPS1P17812 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTPS1P17812 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.76■□□□□ 0.43
CTPS1P17812 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.76■□□□□ 0.43
CTPS1P17812 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS1P17812 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS1P17812 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
CTPS1P17812 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS1P17812 REXO1L11P-201ENST00000620964 1927 ntBASIC17.76■□□□□ 0.43
CTPS1P17812 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
CTPS1P17812 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CTPS1P17812 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.76■□□□□ 0.43
CTPS1P17812 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS1P17812 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CTPS1P17812 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS1P17812 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS1P17812 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS1P17812 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTPS1P17812 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.75■□□□□ 0.43
CTPS1P17812 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.75■□□□□ 0.43
CTPS1P17812 AL450487.1-201ENST00000426799 995 ntBASIC17.75■□□□□ 0.43
CTPS1P17812 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.75■□□□□ 0.43
CTPS1P17812 AC132008.2-207ENST00000454517 770 ntBASIC17.75■□□□□ 0.43
CTPS1P17812 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.75■□□□□ 0.43
CTPS1P17812 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS1P17812 KRT126P-201ENST00000549467 1181 ntBASIC17.75■□□□□ 0.43
CTPS1P17812 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.75■□□□□ 0.43
CTPS1P17812 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.75■□□□□ 0.43
CTPS1P17812 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.75■□□□□ 0.43
CTPS1P17812 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.75■□□□□ 0.43
CTPS1P17812 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.75■□□□□ 0.43
CTPS1P17812 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS1P17812 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.75■□□□□ 0.43
CTPS1P17812 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS1P17812 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CTPS1P17812 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS1P17812 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS1P17812 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS1P17812 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS1P17812 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS1P17812 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS1P17812 AL355312.1-201ENST00000407115 2176 ntBASIC17.74■□□□□ 0.43
CTPS1P17812 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS1P17812 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS1P17812 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS1P17812 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.74■□□□□ 0.43
CTPS1P17812 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms