Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYN1P17600 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.11■□□□□ 0.65
SYN1P17600 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.11■□□□□ 0.65
SYN1P17600 RBPMS2P1-201ENST00000437762 623 ntBASIC19.11■□□□□ 0.65
SYN1P17600 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYN1P17600 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.11■□□□□ 0.65
SYN1P17600 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.11■□□□□ 0.65
SYN1P17600 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYN1P17600 AC099522.2-201ENST00000607001 744 ntBASIC19.11■□□□□ 0.65
SYN1P17600 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYN1P17600 AP001059.3-201ENST00000619053 235 ntBASIC19.11■□□□□ 0.65
SYN1P17600 SLC25A24-204ENST00000569674 2357 ntBASIC19.11■□□□□ 0.65
SYN1P17600 AC093484.2-201ENST00000580996 2166 ntBASIC19.1■□□□□ 0.65
SYN1P17600 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYN1P17600 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.1■□□□□ 0.65
SYN1P17600 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYN1P17600 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYN1P17600 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.1■□□□□ 0.65
SYN1P17600 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.1■□□□□ 0.65
SYN1P17600 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYN1P17600 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SYN1P17600 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.1■□□□□ 0.65
SYN1P17600 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.1■□□□□ 0.65
SYN1P17600 FAM185BP-201ENST00000443595 716 ntBASIC19.1■□□□□ 0.65
SYN1P17600 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SYN1P17600 RN7SL692P-201ENST00000464677 288 ntBASIC19.1■□□□□ 0.65
SYN1P17600 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYN1P17600 STK19B-204ENST00000512515 211 ntBASIC19.1■□□□□ 0.65
SYN1P17600 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.1■□□□□ 0.65
SYN1P17600 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.1■□□□□ 0.65
SYN1P17600 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.1■□□□□ 0.65
SYN1P17600 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.1■□□□□ 0.65
SYN1P17600 AC140878.1-201ENST00000565277 250 ntBASIC19.1■□□□□ 0.65
SYN1P17600 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.1■□□□□ 0.65
SYN1P17600 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYN1P17600 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYN1P17600 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYN1P17600 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYN1P17600 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SYN1P17600 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SYN1P17600 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SYN1P17600 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYN1P17600 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SYN1P17600 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SYN1P17600 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.09■□□□□ 0.65
SYN1P17600 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYN1P17600 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SYN1P17600 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYN1P17600 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.09■□□□□ 0.65
SYN1P17600 GPS2P2-201ENST00000430745 888 ntBASIC19.09■□□□□ 0.65
SYN1P17600 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.09■□□□□ 0.65
SYN1P17600 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.09■□□□□ 0.65
SYN1P17600 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYN1P17600 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.09■□□□□ 0.65
SYN1P17600 FAM86C2P-203ENST00000528684 1004 ntBASIC19.09■□□□□ 0.65
SYN1P17600 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.09■□□□□ 0.65
SYN1P17600 AC109462.3-201ENST00000573934 613 ntBASIC19.09■□□□□ 0.65
SYN1P17600 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.09■□□□□ 0.65
SYN1P17600 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SYN1P17600 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.09■□□□□ 0.65
SYN1P17600 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.09■□□□□ 0.65
SYN1P17600 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYN1P17600 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.09■□□□□ 0.65
SYN1P17600 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SYN1P17600 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SYN1P17600 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SYN1P17600 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SYN1P17600 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SYN1P17600 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SYN1P17600 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SYN1P17600 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.08■□□□□ 0.65
SYN1P17600 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.08■□□□□ 0.65
SYN1P17600 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SYN1P17600 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.08■□□□□ 0.65
SYN1P17600 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.08■□□□□ 0.65
SYN1P17600 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SYN1P17600 GMCL1P1-201ENST00000463439 1581 ntBASIC19.08■□□□□ 0.65
SYN1P17600 AC008677.1-201ENST00000519230 1561 ntBASIC19.08■□□□□ 0.65
SYN1P17600 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SYN1P17600 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SYN1P17600 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SYN1P17600 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SYN1P17600 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SYN1P17600 COX5BP8-201ENST00000416911 349 ntBASIC19.08■□□□□ 0.64
SYN1P17600 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.08■□□□□ 0.64
SYN1P17600 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SYN1P17600 SERBP1P5-201ENST00000510079 1181 ntBASIC19.08■□□□□ 0.64
SYN1P17600 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SYN1P17600 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.08■□□□□ 0.64
SYN1P17600 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.08■□□□□ 0.64
SYN1P17600 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SYN1P17600 ACTL9-202ENST00000612068 1252 ntBASIC19.08■□□□□ 0.64
SYN1P17600 AL662799.1-202ENST00000614205 422 ntBASIC19.08■□□□□ 0.64
SYN1P17600 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.08■□□□□ 0.64
SYN1P17600 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.08■□□□□ 0.64
SYN1P17600 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SYN1P17600 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SYN1P17600 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
SYN1P17600 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SYN1P17600 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms