Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.72■□□□□ 0.27
NCK1P16333 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.72■□□□□ 0.27
NCK1P16333 AC116407.2-201ENST00000613639 860 ntBASIC16.72■□□□□ 0.27
NCK1P16333 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
NCK1P16333 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NCK1P16333 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
NCK1P16333 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.72■□□□□ 0.27
NCK1P16333 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
NCK1P16333 AC046158.3-201ENST00000624947 2558 ntBASIC16.72■□□□□ 0.27
NCK1P16333 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
NCK1P16333 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NCK1P16333 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.71■□□□□ 0.27
NCK1P16333 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 AC092338.2-201ENST00000568827 1415 ntBASIC16.71■□□□□ 0.27
NCK1P16333 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NCK1P16333 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.71■□□□□ 0.27
NCK1P16333 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.71■□□□□ 0.27
NCK1P16333 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NCK1P16333 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 ABHD17AP1-201ENST00000358206 933 ntBASIC16.71■□□□□ 0.27
NCK1P16333 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.71■□□□□ 0.27
NCK1P16333 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NCK1P16333 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.71■□□□□ 0.27
NCK1P16333 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NCK1P16333 KRT18P29-201ENST00000397031 1267 ntBASIC16.71■□□□□ 0.27
NCK1P16333 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
NCK1P16333 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 AL355355.2-201ENST00000442321 338 ntBASIC16.71■□□□□ 0.27
NCK1P16333 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NCK1P16333 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.71■□□□□ 0.27
NCK1P16333 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.71■□□□□ 0.27
NCK1P16333 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.71■□□□□ 0.27
NCK1P16333 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.71■□□□□ 0.27
NCK1P16333 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NCK1P16333 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.71■□□□□ 0.27
NCK1P16333 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.71■□□□□ 0.27
NCK1P16333 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
NCK1P16333 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.71■□□□□ 0.27
NCK1P16333 AC008741.2-201ENST00000612792 3115 ntBASIC16.71■□□□□ 0.27
NCK1P16333 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCK1P16333 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NCK1P16333 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
NCK1P16333 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NCK1P16333 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NCK1P16333 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.7■□□□□ 0.26
NCK1P16333 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
NCK1P16333 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.7■□□□□ 0.26
NCK1P16333 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NCK1P16333 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NCK1P16333 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
NCK1P16333 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.7■□□□□ 0.26
NCK1P16333 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.7■□□□□ 0.26
NCK1P16333 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
NCK1P16333 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.7■□□□□ 0.26
NCK1P16333 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.7■□□□□ 0.26
NCK1P16333 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.7■□□□□ 0.26
NCK1P16333 RPS2P55-201ENST00000397318 883 ntBASIC16.7■□□□□ 0.26
NCK1P16333 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.7■□□□□ 0.26
NCK1P16333 SEC1P-202ENST00000473944 940 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms