Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SCG2P13521 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.33■□□□□ 0.84
SCG2P13521 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCG2P13521 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SCG2P13521 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.33■□□□□ 0.84
SCG2P13521 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCG2P13521 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
SCG2P13521 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCG2P13521 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.33■□□□□ 0.84
SCG2P13521 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.33■□□□□ 0.84
SCG2P13521 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SCG2P13521 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.32■□□□□ 0.84
SCG2P13521 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCG2P13521 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.32■□□□□ 0.84
SCG2P13521 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCG2P13521 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG2P13521 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SCG2P13521 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.32■□□□□ 0.84
SCG2P13521 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG2P13521 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG2P13521 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG2P13521 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.32■□□□□ 0.84
SCG2P13521 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCG2P13521 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.32■□□□□ 0.84
SCG2P13521 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.32■□□□□ 0.84
SCG2P13521 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.32■□□□□ 0.84
SCG2P13521 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SCG2P13521 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.32■□□□□ 0.84
SCG2P13521 AD001527.2-201ENST00000622994 785 ntBASIC20.32■□□□□ 0.84
SCG2P13521 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.32■□□□□ 0.84
SCG2P13521 KRT8P10-201ENST00000450021 1447 ntBASIC20.32■□□□□ 0.84
SCG2P13521 PCDHB18P-201ENST00000524813 2368 ntBASIC20.32■□□□□ 0.84
SCG2P13521 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG2P13521 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SCG2P13521 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG2P13521 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SCG2P13521 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.32■□□□□ 0.84
SCG2P13521 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SCG2P13521 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG2P13521 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCG2P13521 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG2P13521 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SCG2P13521 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCG2P13521 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG2P13521 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG2P13521 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.31■□□□□ 0.84
SCG2P13521 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.31■□□□□ 0.84
SCG2P13521 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG2P13521 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.31■□□□□ 0.84
SCG2P13521 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG2P13521 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.31■□□□□ 0.84
SCG2P13521 AC091304.2-201ENST00000564639 760 ntBASIC20.31■□□□□ 0.84
SCG2P13521 BCL2-203ENST00000589955 5011 ntBASIC20.31■□□□□ 0.84
SCG2P13521 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG2P13521 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCG2P13521 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCG2P13521 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
SCG2P13521 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCG2P13521 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG2P13521 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCG2P13521 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG2P13521 AL353593.2-201ENST00000602529 1483 ntBASIC20.3■□□□□ 0.84
SCG2P13521 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SCG2P13521 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SCG2P13521 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.3■□□□□ 0.84
SCG2P13521 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.3■□□□□ 0.84
SCG2P13521 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.3■□□□□ 0.84
SCG2P13521 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.3■□□□□ 0.84
SCG2P13521 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.3■□□□□ 0.84
SCG2P13521 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.3■□□□□ 0.84
SCG2P13521 AC111152.3-201ENST00000569699 673 ntBASIC20.3■□□□□ 0.84
SCG2P13521 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.3■□□□□ 0.84
SCG2P13521 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.3■□□□□ 0.84
SCG2P13521 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SCG2P13521 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG2P13521 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG2P13521 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCG2P13521 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG2P13521 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCG2P13521 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG2P13521 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.29■□□□□ 0.84
SCG2P13521 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCG2P13521 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
SCG2P13521 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SCG2P13521 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG2P13521 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms