Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CCL4P13236 DDX43P3-201ENST00000441064 443 ntBASIC16.61■□□□□ 0.25
CCL4P13236 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL4P13236 YBX1P5-201ENST00000509441 847 ntBASIC16.61■□□□□ 0.25
CCL4P13236 AC093503.3-201ENST00000624917 2352 ntBASIC16.61■□□□□ 0.25
CCL4P13236 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCL4P13236 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL4P13236 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCL4P13236 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL4P13236 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL4P13236 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL4P13236 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL4P13236 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCL4P13236 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL4P13236 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.61■□□□□ 0.25
CCL4P13236 GPR89P-201ENST00000407924 1495 ntBASIC16.61■□□□□ 0.25
CCL4P13236 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL4P13236 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.6■□□□□ 0.25
CCL4P13236 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 SNHG9-202ENST00000564014 471 ntBASIC16.6■□□□□ 0.25
CCL4P13236 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.6■□□□□ 0.25
CCL4P13236 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CCL4P13236 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL4P13236 AL078644.1-201ENST00000609881 752 ntBASIC16.6■□□□□ 0.25
CCL4P13236 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 C20orf181-201ENST00000623918 480 ntBASIC16.6■□□□□ 0.25
CCL4P13236 AL805961.1-202ENST00000641562 540 ntBASIC16.6■□□□□ 0.25
CCL4P13236 AC098818.2-201ENST00000564925 2320 ntBASIC16.6■□□□□ 0.25
CCL4P13236 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 KRT18P28-201ENST00000453838 1332 ntBASIC16.6■□□□□ 0.25
CCL4P13236 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL4P13236 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCL4P13236 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CCL4P13236 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.59■□□□□ 0.25
CCL4P13236 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.59■□□□□ 0.25
CCL4P13236 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 AC020763.4-201ENST00000623414 4170 ntBASIC16.59■□□□□ 0.25
CCL4P13236 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCL4P13236 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCL4P13236 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 MRPL20P1-201ENST00000400819 433 ntBASIC16.59■□□□□ 0.25
CCL4P13236 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.59■□□□□ 0.25
CCL4P13236 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.59■□□□□ 0.25
CCL4P13236 LINC00982-205ENST00000420957 435 ntBASIC16.59■□□□□ 0.25
CCL4P13236 HTR5BP-201ENST00000430851 1154 ntBASIC16.59■□□□□ 0.25
CCL4P13236 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.59■□□□□ 0.25
CCL4P13236 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CCL4P13236 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CCL4P13236 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.59■□□□□ 0.25
CCL4P13236 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.59■□□□□ 0.25
CCL4P13236 AL353135.1-201ENST00000606729 504 ntBASIC16.59■□□□□ 0.25
CCL4P13236 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CCL4P13236 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCL4P13236 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.59■□□□□ 0.25
CCL4P13236 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL4P13236 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCL4P13236 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCL4P13236 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms