Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC172P0C7W6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC172P0C7W6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC172P0C7W6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 YBX1P2-201ENST00000489612 999 ntBASIC19.13■□□□□ 0.65
CCDC172P0C7W6 ZNF444P1-201ENST00000559497 298 ntBASIC19.13■□□□□ 0.65
CCDC172P0C7W6 AC004263.2-201ENST00000617183 678 ntBASIC19.13■□□□□ 0.65
CCDC172P0C7W6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC172P0C7W6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 AL645608.8-201ENST00000606034 2086 ntBASIC19.12■□□□□ 0.65
CCDC172P0C7W6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 TERF1P1-201ENST00000311003 1181 ntBASIC19.12■□□□□ 0.65
CCDC172P0C7W6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 HOMER2P1-201ENST00000455653 964 ntBASIC19.12■□□□□ 0.65
CCDC172P0C7W6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 AC139887.4-201ENST00000607877 719 ntBASIC19.12■□□□□ 0.65
CCDC172P0C7W6 AC012306.2-201ENST00000609350 630 ntBASIC19.12■□□□□ 0.65
CCDC172P0C7W6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC172P0C7W6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 SPDYE15P-201ENST00000424157 909 ntBASIC19.11■□□□□ 0.65
CCDC172P0C7W6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 AP003733.1-201ENST00000491725 852 ntBASIC19.11■□□□□ 0.65
CCDC172P0C7W6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 AL162727.3-201ENST00000635661 2787 ntBASIC19.11■□□□□ 0.65
CCDC172P0C7W6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC172P0C7W6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms