Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TPM1P09493 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM1P09493 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TPM1P09493 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
TPM1P09493 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM1P09493 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM1P09493 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM1P09493 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.51■□□□□ 0.71
TPM1P09493 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM1P09493 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM1P09493 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM1P09493 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM1P09493 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.51■□□□□ 0.71
TPM1P09493 AC026471.5-201ENST00000615068 467 ntBASIC19.51■□□□□ 0.71
TPM1P09493 AC113410.3-201ENST00000623366 203 ntBASIC19.51■□□□□ 0.71
TPM1P09493 AC116562.4-202ENST00000641738 218 ntBASIC19.51■□□□□ 0.71
TPM1P09493 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM1P09493 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TPM1P09493 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM1P09493 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.51■□□□□ 0.71
TPM1P09493 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TPM1P09493 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM1P09493 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
TPM1P09493 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
TPM1P09493 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TPM1P09493 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM1P09493 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TPM1P09493 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM1P09493 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TPM1P09493 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM1P09493 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TPM1P09493 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.5■□□□□ 0.71
TPM1P09493 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TPM1P09493 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM1P09493 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.5■□□□□ 0.71
TPM1P09493 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.5■□□□□ 0.71
TPM1P09493 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.5■□□□□ 0.71
TPM1P09493 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.5■□□□□ 0.71
TPM1P09493 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TPM1P09493 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM1P09493 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TPM1P09493 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TPM1P09493 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM1P09493 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.5■□□□□ 0.71
TPM1P09493 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.5■□□□□ 0.71
TPM1P09493 AL049637.2-201ENST00000641778 930 ntBASIC19.5■□□□□ 0.71
TPM1P09493 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.5■□□□□ 0.71
TPM1P09493 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.5■□□□□ 0.71
TPM1P09493 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TPM1P09493 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TPM1P09493 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM1P09493 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM1P09493 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM1P09493 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.5■□□□□ 0.71
TPM1P09493 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM1P09493 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM1P09493 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM1P09493 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM1P09493 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM1P09493 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM1P09493 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM1P09493 UNC93B2-201ENST00000285383 730 ntBASIC19.49■□□□□ 0.71
TPM1P09493 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM1P09493 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TPM1P09493 UBE2SP1-201ENST00000450587 669 ntBASIC19.49■□□□□ 0.71
TPM1P09493 AC233702.5-201ENST00000584107 538 ntBASIC19.49■□□□□ 0.71
TPM1P09493 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM1P09493 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.49■□□□□ 0.71
TPM1P09493 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM1P09493 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM1P09493 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM1P09493 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM1P09493 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM1P09493 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM1P09493 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM1P09493 AC092338.2-201ENST00000568827 1415 ntBASIC19.49■□□□□ 0.71
TPM1P09493 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TPM1P09493 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM1P09493 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM1P09493 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM1P09493 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM1P09493 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.48■□□□□ 0.71
TPM1P09493 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TPM1P09493 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.48■□□□□ 0.71
TPM1P09493 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TPM1P09493 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TPM1P09493 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.48■□□□□ 0.71
TPM1P09493 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.48■□□□□ 0.71
TPM1P09493 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.48■□□□□ 0.71
TPM1P09493 AC142381.4-202ENST00000563973 229 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms