Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 FLJ13224-201ENST00000313737 1514 ntBASIC19.46■□□□□ 0.71
MMP3P08254 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP3P08254 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP3P08254 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP3P08254 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP3P08254 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP3P08254 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.46■□□□□ 0.71
MMP3P08254 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP3P08254 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MMP3P08254 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP3P08254 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.46■□□□□ 0.71
MMP3P08254 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.46■□□□□ 0.71
MMP3P08254 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.46■□□□□ 0.71
MMP3P08254 OR7E47P-204ENST00000575924 449 ntBASIC19.46■□□□□ 0.71
MMP3P08254 MIR4469-201ENST00000583919 79 ntBASIC19.46■□□□□ 0.71
MMP3P08254 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP3P08254 AC010507.1-201ENST00000633895 436 ntBASIC19.46■□□□□ 0.71
MMP3P08254 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.46■□□□□ 0.71
MMP3P08254 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
MMP3P08254 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP3P08254 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.46■□□□□ 0.71
MMP3P08254 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP3P08254 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.46■□□□□ 0.71
MMP3P08254 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP3P08254 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MMP3P08254 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP3P08254 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
MMP3P08254 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.45■□□□□ 0.7
MMP3P08254 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
MMP3P08254 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.45■□□□□ 0.7
MMP3P08254 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MMP3P08254 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.45■□□□□ 0.7
MMP3P08254 C20orf181-201ENST00000623918 480 ntBASIC19.45■□□□□ 0.7
MMP3P08254 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
MMP3P08254 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.45■□□□□ 0.7
MMP3P08254 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
MMP3P08254 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.45■□□□□ 0.7
MMP3P08254 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.45■□□□□ 0.7
MMP3P08254 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP3P08254 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.45■□□□□ 0.7
MMP3P08254 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.45■□□□□ 0.7
MMP3P08254 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP3P08254 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP3P08254 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MMP3P08254 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MMP3P08254 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP3P08254 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
MMP3P08254 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.44■□□□□ 0.7
MMP3P08254 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP3P08254 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MMP3P08254 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MMP3P08254 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP3P08254 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP3P08254 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MMP3P08254 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.44■□□□□ 0.7
MMP3P08254 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.44■□□□□ 0.7
MMP3P08254 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP3P08254 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MMP3P08254 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.44■□□□□ 0.7
MMP3P08254 AL596442.2-201ENST00000610240 980 ntBASIC19.44■□□□□ 0.7
MMP3P08254 GGTLC5P-201ENST00000617623 998 ntBASIC19.44■□□□□ 0.7
MMP3P08254 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP3P08254 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP3P08254 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.44■□□□□ 0.7
MMP3P08254 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MMP3P08254 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MMP3P08254 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MMP3P08254 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP3P08254 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP3P08254 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP3P08254 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.43■□□□□ 0.7
MMP3P08254 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MMP3P08254 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.43■□□□□ 0.7
MMP3P08254 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.43■□□□□ 0.7
MMP3P08254 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.43■□□□□ 0.7
MMP3P08254 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.43■□□□□ 0.7
MMP3P08254 AC096734.2-201ENST00000562054 433 ntBASIC19.43■□□□□ 0.7
MMP3P08254 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.43■□□□□ 0.7
MMP3P08254 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.43■□□□□ 0.7
MMP3P08254 AL078644.1-201ENST00000609881 752 ntBASIC19.43■□□□□ 0.7
MMP3P08254 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP3P08254 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP3P08254 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP3P08254 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms