Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.14■□□□□ 0.18
P04436 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.14■□□□□ 0.17
P04436 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.14■□□□□ 0.17
P04436 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
P04436 RPS2P28-201ENST00000314255 741 ntBASIC16.14■□□□□ 0.17
P04436 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 MRPL3P1-201ENST00000400109 1033 ntBASIC16.14■□□□□ 0.17
P04436 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.14■□□□□ 0.17
P04436 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.14■□□□□ 0.17
P04436 AC093909.1-201ENST00000504731 1122 ntBASIC16.14■□□□□ 0.17
P04436 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.14■□□□□ 0.17
P04436 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
P04436 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.14■□□□□ 0.17
P04436 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.14■□□□□ 0.17
P04436 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.14■□□□□ 0.17
P04436 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
P04436 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.14■□□□□ 0.17
P04436 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
P04436 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.14■□□□□ 0.17
P04436 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.14■□□□□ 0.17
P04436 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04436 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.13■□□□□ 0.17
P04436 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.13■□□□□ 0.17
P04436 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
P04436 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.13■□□□□ 0.17
P04436 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.13■□□□□ 0.17
P04436 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.13■□□□□ 0.17
P04436 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.13■□□□□ 0.17
P04436 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.13■□□□□ 0.17
P04436 RNPS1P1-201ENST00000507437 918 ntBASIC16.13■□□□□ 0.17
P04436 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 IGHV3-52-201ENST00000519770 353 ntBASIC16.13■□□□□ 0.17
P04436 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.13■□□□□ 0.17
P04436 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
P04436 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.13■□□□□ 0.17
P04436 AP001005.1-201ENST00000571755 1248 ntBASIC16.13■□□□□ 0.17
P04436 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.13■□□□□ 0.17
P04436 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.13■□□□□ 0.17
P04436 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.13■□□□□ 0.17
P04436 AD001527.2-201ENST00000622994 785 ntBASIC16.13■□□□□ 0.17
P04436 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.13■□□□□ 0.17
P04436 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
P04436 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
P04436 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.13■□□□□ 0.17
P04436 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04436 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.13■□□□□ 0.17
P04436 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.13■□□□□ 0.17
P04436 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.12■□□□□ 0.17
P04436 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
P04436 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.12■□□□□ 0.17
P04436 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.12■□□□□ 0.17
P04436 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.12■□□□□ 0.17
P04436 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.12■□□□□ 0.17
P04436 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.12■□□□□ 0.17
P04436 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
P04436 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.12■□□□□ 0.17
P04436 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
P04436 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.12■□□□□ 0.17
P04436 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.12■□□□□ 0.17
P04436 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms