Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.97■□□□□ 0.47
PMPCBO75439 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMPCBO75439 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.97■□□□□ 0.47
PMPCBO75439 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMPCBO75439 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMPCBO75439 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMPCBO75439 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMPCBO75439 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.97■□□□□ 0.47
PMPCBO75439 AC091607.1-201ENST00000490318 1060 ntBASIC17.97■□□□□ 0.47
PMPCBO75439 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.97■□□□□ 0.47
PMPCBO75439 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.97■□□□□ 0.47
PMPCBO75439 AC091076.1-201ENST00000610741 619 ntBASIC17.97■□□□□ 0.47
PMPCBO75439 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.97■□□□□ 0.47
PMPCBO75439 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.97■□□□□ 0.47
PMPCBO75439 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PMPCBO75439 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMPCBO75439 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PMPCBO75439 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PMPCBO75439 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMPCBO75439 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.97■□□□□ 0.47
PMPCBO75439 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.97■□□□□ 0.47
PMPCBO75439 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.97■□□□□ 0.47
PMPCBO75439 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PMPCBO75439 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.97■□□□□ 0.47
PMPCBO75439 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PMPCBO75439 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PMPCBO75439 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMPCBO75439 LINC00304-203ENST00000565008 1864 ntBASIC17.97■□□□□ 0.47
PMPCBO75439 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.97■□□□□ 0.47
PMPCBO75439 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.97■□□□□ 0.47
PMPCBO75439 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PMPCBO75439 AC010460.3-201ENST00000511359 1579 ntBASIC17.96■□□□□ 0.47
PMPCBO75439 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
PMPCBO75439 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.96■□□□□ 0.47
PMPCBO75439 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.96■□□□□ 0.47
PMPCBO75439 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.96■□□□□ 0.47
PMPCBO75439 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMPCBO75439 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
PMPCBO75439 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMPCBO75439 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
PMPCBO75439 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMPCBO75439 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PMPCBO75439 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMPCBO75439 AC096633.1-201ENST00000422446 749 ntBASIC17.96■□□□□ 0.47
PMPCBO75439 AP002383.4-201ENST00000442518 975 ntBASIC17.96■□□□□ 0.47
PMPCBO75439 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMPCBO75439 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.96■□□□□ 0.47
PMPCBO75439 AP002414.4-201ENST00000589764 1148 ntBASIC17.96■□□□□ 0.47
PMPCBO75439 AC005336.2-201ENST00000593183 939 ntBASIC17.96■□□□□ 0.47
PMPCBO75439 AL353801.3-201ENST00000609898 542 ntBASIC17.96■□□□□ 0.47
PMPCBO75439 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMPCBO75439 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMPCBO75439 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PMPCBO75439 AC106820.2-201ENST00000563775 3264 ntBASIC17.96■□□□□ 0.47
PMPCBO75439 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.96■□□□□ 0.47
PMPCBO75439 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMPCBO75439 BX276092.7-203ENST00000637198 1536 ntBASIC17.96■□□□□ 0.47
PMPCBO75439 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMPCBO75439 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PMPCBO75439 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.96■□□□□ 0.47
PMPCBO75439 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PMPCBO75439 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMPCBO75439 AC133963.1-201ENST00000504166 1679 ntBASIC17.96■□□□□ 0.47
PMPCBO75439 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PMPCBO75439 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PMPCBO75439 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
PMPCBO75439 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
PMPCBO75439 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.95■□□□□ 0.46
PMPCBO75439 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.95■□□□□ 0.46
PMPCBO75439 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PMPCBO75439 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PMPCBO75439 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PMPCBO75439 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PMPCBO75439 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PMPCBO75439 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.95■□□□□ 0.46
PMPCBO75439 AC069148.1-201ENST00000608741 768 ntBASIC17.95■□□□□ 0.46
PMPCBO75439 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PMPCBO75439 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PMPCBO75439 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.95■□□□□ 0.46
PMPCBO75439 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.95■□□□□ 0.46
PMPCBO75439 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PMPCBO75439 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PMPCBO75439 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
PMPCBO75439 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PMPCBO75439 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
PMPCBO75439 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PMPCBO75439 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PMPCBO75439 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.95■□□□□ 0.46
PMPCBO75439 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PMPCBO75439 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PMPCBO75439 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMPCBO75439 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.94■□□□□ 0.46
PMPCBO75439 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMPCBO75439 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMPCBO75439 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PMPCBO75439 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PMPCBO75439 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMPCBO75439 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMPCBO75439 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PMPCBO75439 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 4836.7 ms