Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH4O75427 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH4O75427 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH4O75427 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.39■□□□□ 0.53
LRCH4O75427 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.39■□□□□ 0.53
LRCH4O75427 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRCH4O75427 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRCH4O75427 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRCH4O75427 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRCH4O75427 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRCH4O75427 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRCH4O75427 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 AC012313.1-201ENST00000593393 3059 ntBASIC18.38■□□□□ 0.53
LRCH4O75427 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.38■□□□□ 0.53
LRCH4O75427 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 HTR7P1-202ENST00000624664 4411 ntBASIC18.38■□□□□ 0.53
LRCH4O75427 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.38■□□□□ 0.53
LRCH4O75427 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.38■□□□□ 0.53
LRCH4O75427 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
LRCH4O75427 AP000550.4-202ENST00000639755 178 ntBASIC18.38■□□□□ 0.53
LRCH4O75427 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.38■□□□□ 0.53
LRCH4O75427 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
LRCH4O75427 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH4O75427 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.38■□□□□ 0.53
LRCH4O75427 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.38■□□□□ 0.53
LRCH4O75427 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.38■□□□□ 0.53
LRCH4O75427 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.38■□□□□ 0.53
LRCH4O75427 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LRCH4O75427 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.37■□□□□ 0.53
LRCH4O75427 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.37■□□□□ 0.53
LRCH4O75427 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 ARMC10P1-201ENST00000313754 855 ntBASIC18.37■□□□□ 0.53
LRCH4O75427 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.37■□□□□ 0.53
LRCH4O75427 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LRCH4O75427 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.37■□□□□ 0.53
LRCH4O75427 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.37■□□□□ 0.53
LRCH4O75427 DRAXINP1-201ENST00000437611 948 ntBASIC18.37■□□□□ 0.53
LRCH4O75427 TPSP2-201ENST00000561760 610 ntBASIC18.37■□□□□ 0.53
LRCH4O75427 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.37■□□□□ 0.53
LRCH4O75427 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.37■□□□□ 0.53
LRCH4O75427 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.37■□□□□ 0.53
LRCH4O75427 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.37■□□□□ 0.53
LRCH4O75427 AL445228.2-201ENST00000605589 952 ntBASIC18.37■□□□□ 0.53
LRCH4O75427 AL139327.4-201ENST00000612362 153 ntBASIC18.37■□□□□ 0.53
LRCH4O75427 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRCH4O75427 AL358472.4-201ENST00000633140 710 ntBASIC18.37■□□□□ 0.53
LRCH4O75427 KRT18P1-202ENST00000452408 1331 ntBASIC18.37■□□□□ 0.53
LRCH4O75427 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.37■□□□□ 0.53
LRCH4O75427 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.37■□□□□ 0.53
LRCH4O75427 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.37■□□□□ 0.53
LRCH4O75427 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LRCH4O75427 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.37■□□□□ 0.53
LRCH4O75427 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH4O75427 AC080080.1-201ENST00000625121 2420 ntBASIC18.37■□□□□ 0.53
LRCH4O75427 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.37■□□□□ 0.53
LRCH4O75427 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH4O75427 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH4O75427 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH4O75427 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH4O75427 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH4O75427 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH4O75427 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH4O75427 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH4O75427 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH4O75427 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.36■□□□□ 0.53
LRCH4O75427 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH4O75427 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LRCH4O75427 AC233702.3-201ENST00000578656 1387 ntBASIC18.36■□□□□ 0.53
LRCH4O75427 AP001094.4-201ENST00000579008 2176 ntBASIC18.36■□□□□ 0.53
LRCH4O75427 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.36■□□□□ 0.53
LRCH4O75427 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.36■□□□□ 0.53
LRCH4O75427 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.36■□□□□ 0.53
LRCH4O75427 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms