Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRIM13O60858 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM13O60858 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM13O60858 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM13O60858 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 TNRC18P3-201ENST00000441896 2691 ntBASIC17.41■□□□□ 0.38
TRIM13O60858 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM13O60858 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
TRIM13O60858 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM13O60858 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 NAPSB-206ENST00000562112 1266 ntBASIC17.41■□□□□ 0.38
TRIM13O60858 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRIM13O60858 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM13O60858 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM13O60858 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM13O60858 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 AC024563.2-201ENST00000603282 481 ntBASIC17.41■□□□□ 0.38
TRIM13O60858 FAM87A-204ENST00000613235 858 ntBASIC17.41■□□□□ 0.38
TRIM13O60858 AC010947.1-201ENST00000623454 693 ntBASIC17.41■□□□□ 0.38
TRIM13O60858 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM13O60858 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM13O60858 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM13O60858 AC106886.4-201ENST00000623557 2502 ntBASIC17.41■□□□□ 0.38
TRIM13O60858 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM13O60858 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM13O60858 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM13O60858 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM13O60858 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRIM13O60858 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
TRIM13O60858 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
TRIM13O60858 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRIM13O60858 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM13O60858 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM13O60858 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM13O60858 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.4■□□□□ 0.38
TRIM13O60858 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM13O60858 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM13O60858 LYSMD4-203ENST00000378904 2122 ntBASIC17.4■□□□□ 0.38
TRIM13O60858 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM13O60858 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM13O60858 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM13O60858 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM13O60858 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM13O60858 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM13O60858 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM13O60858 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM13O60858 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRIM13O60858 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM13O60858 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM13O60858 BX276092.7-203ENST00000637198 1536 ntBASIC17.4■□□□□ 0.38
TRIM13O60858 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM13O60858 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM13O60858 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM13O60858 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM13O60858 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
TRIM13O60858 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM13O60858 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM13O60858 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM13O60858 KRT8P9-201ENST00000558927 1449 ntBASIC17.39■□□□□ 0.38
TRIM13O60858 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM13O60858 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM13O60858 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM13O60858 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM13O60858 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM13O60858 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM13O60858 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM13O60858 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRIM13O60858 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM13O60858 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM13O60858 SNORA78-201ENST00000459373 127 ntBASIC17.39■□□□□ 0.37
TRIM13O60858 ECEL1P2-202ENST00000465689 757 ntBASIC17.39■□□□□ 0.37
TRIM13O60858 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM13O60858 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM13O60858 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM13O60858 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM13O60858 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM13O60858 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM13O60858 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRIM13O60858 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM13O60858 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM13O60858 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM13O60858 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM13O60858 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
TRIM13O60858 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRIM13O60858 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM13O60858 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms