Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 PCDHB18P-201ENST00000524813 2368 ntBASIC16.62■□□□□ 0.25
PRAMEF2O60811 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 AL121912.1-201ENST00000603683 238 ntBASIC16.62■□□□□ 0.25
PRAMEF2O60811 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 GNAS-203ENST00000306120 1878 ntBASIC16.61■□□□□ 0.25
PRAMEF2O60811 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 DDX43P3-201ENST00000441064 443 ntBASIC16.61■□□□□ 0.25
PRAMEF2O60811 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF2O60811 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF2O60811 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 SAPCD2P3-201ENST00000455031 850 ntBASIC16.6■□□□□ 0.25
PRAMEF2O60811 AP002469.2-201ENST00000531724 424 ntBASIC16.6■□□□□ 0.25
PRAMEF2O60811 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF2O60811 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEF2O60811 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF2O60811 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF2O60811 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF2O60811 AC009949.1-201ENST00000623048 1830 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms