Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ZIC3O60481 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.89■□□□□ 0.13
ZIC3O60481 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZIC3O60481 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZIC3O60481 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ZIC3O60481 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.89■□□□□ 0.13
ZIC3O60481 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
ZIC3O60481 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.88■□□□□ 0.13
ZIC3O60481 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
ZIC3O60481 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.88■□□□□ 0.13
ZIC3O60481 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.88■□□□□ 0.13
ZIC3O60481 SPDYE21P-201ENST00000413323 827 ntBASIC15.88■□□□□ 0.13
ZIC3O60481 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.88■□□□□ 0.13
ZIC3O60481 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.88■□□□□ 0.13
ZIC3O60481 SCARNA2-201ENST00000458748 420 ntBASIC15.88■□□□□ 0.13
ZIC3O60481 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.88■□□□□ 0.13
ZIC3O60481 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ZIC3O60481 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 STK25P1-201ENST00000585406 838 ntBASIC15.88■□□□□ 0.13
ZIC3O60481 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.88■□□□□ 0.13
ZIC3O60481 AC073592.4-201ENST00000623827 446 ntBASIC15.88■□□□□ 0.13
ZIC3O60481 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.88■□□□□ 0.13
ZIC3O60481 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 LINC00304-203ENST00000565008 1864 ntBASIC15.88■□□□□ 0.13
ZIC3O60481 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
ZIC3O60481 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZIC3O60481 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
ZIC3O60481 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZIC3O60481 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZIC3O60481 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
ZIC3O60481 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.87■□□□□ 0.13
ZIC3O60481 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ZIC3O60481 AC134043.2-201ENST00000624206 2238 ntBASIC15.87■□□□□ 0.13
ZIC3O60481 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZIC3O60481 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZIC3O60481 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
ZIC3O60481 SIGLEC16-201ENST00000599858 1437 ntBASIC15.87■□□□□ 0.13
ZIC3O60481 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.87■□□□□ 0.13
ZIC3O60481 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
ZIC3O60481 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZIC3O60481 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.87■□□□□ 0.13
ZIC3O60481 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.87■□□□□ 0.13
ZIC3O60481 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZIC3O60481 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZIC3O60481 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.87■□□□□ 0.13
ZIC3O60481 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.87■□□□□ 0.13
ZIC3O60481 MRPL3P1-201ENST00000400109 1033 ntBASIC15.87■□□□□ 0.13
ZIC3O60481 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.87■□□□□ 0.13
ZIC3O60481 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.87■□□□□ 0.13
ZIC3O60481 RNPS1P1-201ENST00000507437 918 ntBASIC15.87■□□□□ 0.13
ZIC3O60481 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.87■□□□□ 0.13
ZIC3O60481 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
ZIC3O60481 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.87■□□□□ 0.13
ZIC3O60481 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.87■□□□□ 0.13
ZIC3O60481 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.87■□□□□ 0.13
ZIC3O60481 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ZIC3O60481 AL139288.1-201ENST00000623748 933 ntBASIC15.87■□□□□ 0.13
ZIC3O60481 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.87■□□□□ 0.13
ZIC3O60481 AL355312.1-201ENST00000407115 2176 ntBASIC15.87■□□□□ 0.13
ZIC3O60481 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.87■□□□□ 0.13
ZIC3O60481 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ZIC3O60481 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZIC3O60481 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZIC3O60481 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
ZIC3O60481 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ZIC3O60481 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
ZIC3O60481 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.87■□□□□ 0.13
ZIC3O60481 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 AC004817.3-201ENST00000602957 2129 ntBASIC15.86■□□□□ 0.13
ZIC3O60481 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
ZIC3O60481 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms