Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 AC105339.3-201ENST00000560043 636 ntBASIC17.53■□□□□ 0.4
PCDHGA12O60330 AC040169.1-201ENST00000565382 521 ntBASIC17.53■□□□□ 0.4
PCDHGA12O60330 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 AC020916.1-201ENST00000587762 1774 ntBASIC17.53■□□□□ 0.4
PCDHGA12O60330 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGA12O60330 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA12O60330 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA12O60330 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA12O60330 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA12O60330 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA12O60330 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA12O60330 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGA12O60330 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA12O60330 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA12O60330 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA12O60330 AC067852.2-201ENST00000590513 2313 ntBASIC17.52■□□□□ 0.4
PCDHGA12O60330 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA12O60330 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA12O60330 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA12O60330 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGA12O60330 RPSAP43-201ENST00000402237 625 ntBASIC17.52■□□□□ 0.4
PCDHGA12O60330 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.52■□□□□ 0.4
PCDHGA12O60330 DNAJB3-201ENST00000446806 729 ntBASIC17.52■□□□□ 0.4
PCDHGA12O60330 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA12O60330 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA12O60330 NKAPP1-205ENST00000585790 367 ntBASIC17.52■□□□□ 0.4
PCDHGA12O60330 MTDHP4-201ENST00000600287 670 ntBASIC17.52■□□□□ 0.4
PCDHGA12O60330 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA12O60330 AC055717.3-201ENST00000622967 595 ntBASIC17.52■□□□□ 0.4
PCDHGA12O60330 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA12O60330 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PCDHGA12O60330 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA12O60330 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGA12O60330 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHGA12O60330 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA12O60330 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA12O60330 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA12O60330 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA12O60330 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDHGA12O60330 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGA12O60330 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
PCDHGA12O60330 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGA12O60330 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA12O60330 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDHGA12O60330 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGA12O60330 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 GPX1P2-201ENST00000429271 606 ntBASIC17.51■□□□□ 0.39
PCDHGA12O60330 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 AC112698.1-201ENST00000510299 916 ntBASIC17.51■□□□□ 0.39
PCDHGA12O60330 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 AP000867.4-201ENST00000641616 219 ntBASIC17.51■□□□□ 0.39
PCDHGA12O60330 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA12O60330 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA12O60330 LINC01126-201ENST00000623515 1646 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms