Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SSX5O60225 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSX5O60225 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSX5O60225 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSX5O60225 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SSX5O60225 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSX5O60225 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SSX5O60225 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSX5O60225 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.19■□□□□ 0.02
SSX5O60225 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SSX5O60225 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSX5O60225 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SSX5O60225 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.18■□□□□ 0.02
SSX5O60225 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SSX5O60225 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SSX5O60225 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.18■□□□□ 0.02
SSX5O60225 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSX5O60225 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SSX5O60225 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.18■□□□□ 0.02
SSX5O60225 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SSX5O60225 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SSX5O60225 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSX5O60225 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SSX5O60225 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.18■□□□□ 0.02
SSX5O60225 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.18■□□□□ 0.02
SSX5O60225 CD177P1-201ENST00000606252 935 ntBASIC15.18■□□□□ 0.02
SSX5O60225 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.18■□□□□ 0.02
SSX5O60225 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSX5O60225 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSX5O60225 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SSX5O60225 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSX5O60225 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSX5O60225 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SSX5O60225 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SSX5O60225 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSX5O60225 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.18■□□□□ 0.02
SSX5O60225 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SSX5O60225 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
SSX5O60225 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.17■□□□□ 0.02
SSX5O60225 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.17■□□□□ 0.02
SSX5O60225 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.17■□□□□ 0.02
SSX5O60225 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 AC007326.2-201ENST00000624224 7579 ntBASIC15.17■□□□□ 0.02
SSX5O60225 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SSX5O60225 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SSX5O60225 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.17■□□□□ 0.02
SSX5O60225 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SSX5O60225 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SSX5O60225 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.17■□□□□ 0.02
SSX5O60225 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.17■□□□□ 0.02
SSX5O60225 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.17■□□□□ 0.02
SSX5O60225 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.17■□□□□ 0.02
SSX5O60225 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SSX5O60225 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.17■□□□□ 0.02
SSX5O60225 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SSX5O60225 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.17■□□□□ 0.02
SSX5O60225 CR769767.2-201ENST00000622735 460 ntBASIC15.17■□□□□ 0.02
SSX5O60225 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SSX5O60225 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SSX5O60225 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.17■□□□□ 0.02
SSX5O60225 HLA-J-201ENST00000462773 1622 ntBASIC15.17■□□□□ 0.02
SSX5O60225 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SSX5O60225 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSX5O60225 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
SSX5O60225 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.16■□□□□ 0.02
SSX5O60225 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SSX5O60225 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SSX5O60225 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 AC104390.1-201ENST00000555663 520 ntBASIC15.16■□□□□ 0.02
SSX5O60225 AC009065.1-201ENST00000564055 1225 ntBASIC15.16■□□□□ 0.02
SSX5O60225 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SSX5O60225 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
SSX5O60225 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms