Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 LINC00265-3P-201ENST00000447588 903 ntBASIC15.75■□□□□ 0.11
TRAF3IP2O43734 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 Z69720.1-201ENST00000601483 472 ntBASIC15.75■□□□□ 0.11
TRAF3IP2O43734 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP2O43734 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP2O43734 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms