Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 FZD10-202ENST00000539839 3282 ntBASIC17.66■□□□□ 0.42
LDB2O43679 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LDB2O43679 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.66■□□□□ 0.42
LDB2O43679 LINC00265-3P-201ENST00000447588 903 ntBASIC17.66■□□□□ 0.42
LDB2O43679 KRT17P6-201ENST00000453795 1220 ntBASIC17.66■□□□□ 0.42
LDB2O43679 AC002558.1-201ENST00000488906 803 ntBASIC17.66■□□□□ 0.42
LDB2O43679 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.66■□□□□ 0.42
LDB2O43679 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 AC009533.2-201ENST00000543664 586 ntBASIC17.66■□□□□ 0.42
LDB2O43679 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.66■□□□□ 0.42
LDB2O43679 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
LDB2O43679 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
LDB2O43679 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.66■□□□□ 0.42
LDB2O43679 AC093458.2-201ENST00000623150 629 ntBASIC17.66■□□□□ 0.42
LDB2O43679 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 LYSMD4-203ENST00000378904 2122 ntBASIC17.66■□□□□ 0.42
LDB2O43679 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.66■□□□□ 0.42
LDB2O43679 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 CROCCP2-202ENST00000412962 2773 ntBASIC17.66■□□□□ 0.42
LDB2O43679 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 AC108860.2-201ENST00000562760 2183 ntBASIC17.66■□□□□ 0.42
LDB2O43679 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.66■□□□□ 0.42
LDB2O43679 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.66■□□□□ 0.42
LDB2O43679 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.66■□□□□ 0.42
LDB2O43679 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.65■□□□□ 0.42
LDB2O43679 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.65■□□□□ 0.42
LDB2O43679 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LDB2O43679 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LDB2O43679 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.65■□□□□ 0.42
LDB2O43679 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.65■□□□□ 0.42
LDB2O43679 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.65■□□□□ 0.42
LDB2O43679 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.65■□□□□ 0.42
LDB2O43679 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.65■□□□□ 0.42
LDB2O43679 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
LDB2O43679 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 AC092119.3-201ENST00000612618 583 ntBASIC17.65■□□□□ 0.42
LDB2O43679 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.65■□□□□ 0.42
LDB2O43679 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LDB2O43679 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.65■□□□□ 0.42
LDB2O43679 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.65■□□□□ 0.42
LDB2O43679 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LDB2O43679 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB2O43679 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.65■□□□□ 0.42
LDB2O43679 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.65■□□□□ 0.42
LDB2O43679 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LDB2O43679 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LDB2O43679 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LDB2O43679 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LDB2O43679 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.64■□□□□ 0.41
LDB2O43679 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LDB2O43679 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 NSUN5P1-202ENST00000421140 1535 ntBASIC17.64■□□□□ 0.41
LDB2O43679 NSUN5P2-203ENST00000457352 1529 ntBASIC17.64■□□□□ 0.41
LDB2O43679 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 FAM220CP-201ENST00000395253 831 ntBASIC17.64■□□□□ 0.41
LDB2O43679 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.64■□□□□ 0.41
LDB2O43679 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.64■□□□□ 0.41
LDB2O43679 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.64■□□□□ 0.41
LDB2O43679 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.64■□□□□ 0.41
LDB2O43679 BNIP3P18-201ENST00000593976 575 ntBASIC17.64■□□□□ 0.41
LDB2O43679 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.64■□□□□ 0.41
LDB2O43679 AC011467.2-201ENST00000598425 242 ntBASIC17.64■□□□□ 0.41
LDB2O43679 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.64■□□□□ 0.41
LDB2O43679 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.64■□□□□ 0.41
LDB2O43679 AL049757.1-201ENST00000616842 1596 ntBASIC17.64■□□□□ 0.41
LDB2O43679 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms