Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP2AO43633 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.89■□□□□ 0.77
CHMP2AO43633 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP2AO43633 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2AO43633 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP2AO43633 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHMP2AO43633 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2AO43633 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2AO43633 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2AO43633 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMP2AO43633 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHMP2AO43633 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
CHMP2AO43633 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2AO43633 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CHMP2AO43633 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP2AO43633 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2AO43633 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2AO43633 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2AO43633 AC026396.1-201ENST00000419388 421 ntBASIC19.88■□□□□ 0.77
CHMP2AO43633 DDX43P3-201ENST00000441064 443 ntBASIC19.88■□□□□ 0.77
CHMP2AO43633 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP2AO43633 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2AO43633 MTDHP3-201ENST00000594186 672 ntBASIC19.88■□□□□ 0.77
CHMP2AO43633 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHMP2AO43633 AL121912.1-201ENST00000603683 238 ntBASIC19.88■□□□□ 0.77
CHMP2AO43633 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2AO43633 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2AO43633 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHMP2AO43633 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CHMP2AO43633 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2AO43633 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2AO43633 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2AO43633 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHMP2AO43633 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.87■□□□□ 0.77
CHMP2AO43633 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP2AO43633 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP2AO43633 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP2AO43633 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CHMP2AO43633 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP2AO43633 ABCD1P5-201ENST00000445663 754 ntBASIC19.87■□□□□ 0.77
CHMP2AO43633 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP2AO43633 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP2AO43633 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP2AO43633 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.87■□□□□ 0.77
CHMP2AO43633 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP2AO43633 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP2AO43633 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2AO43633 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CHMP2AO43633 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
CHMP2AO43633 BX276092.7-203ENST00000637198 1536 ntBASIC19.86■□□□□ 0.77
CHMP2AO43633 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2AO43633 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMP2AO43633 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2AO43633 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMP2AO43633 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CHMP2AO43633 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMP2AO43633 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2AO43633 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2AO43633 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP2AO43633 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP2AO43633 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.86■□□□□ 0.77
CHMP2AO43633 AC122714.2-201ENST00000502787 707 ntBASIC19.86■□□□□ 0.77
CHMP2AO43633 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.86■□□□□ 0.77
CHMP2AO43633 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHMP2AO43633 TP73-AS1-207ENST00000624167 988 ntBASIC19.86■□□□□ 0.77
CHMP2AO43633 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2AO43633 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP2AO43633 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2AO43633 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMP2AO43633 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2AO43633 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMP2AO43633 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2AO43633 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2AO43633 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2AO43633 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP2AO43633 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2AO43633 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2AO43633 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2AO43633 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.85■□□□□ 0.77
CHMP2AO43633 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.85■□□□□ 0.77
CHMP2AO43633 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP2AO43633 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.85■□□□□ 0.77
CHMP2AO43633 AC009078.2-202ENST00000463353 338 ntBASIC19.85■□□□□ 0.77
CHMP2AO43633 AC106795.1-205ENST00000512851 1056 ntBASIC19.85■□□□□ 0.77
CHMP2AO43633 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.85■□□□□ 0.77
CHMP2AO43633 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms