Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC29.93■■■□□ 2.38
CUX2O14529 REXO1L6P-201ENST00000603433 1515 ntBASIC29.93■■■□□ 2.38
CUX2O14529 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CUX2O14529 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CUX2O14529 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
CUX2O14529 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC29.93■■■□□ 2.38
CUX2O14529 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC29.93■■■□□ 2.38
CUX2O14529 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC29.93■■■□□ 2.38
CUX2O14529 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
CUX2O14529 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC29.93■■■□□ 2.38
CUX2O14529 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
CUX2O14529 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CUX2O14529 MXI1-205ENST00000393134 889 ntTSL 2 BASIC29.93■■■□□ 2.38
CUX2O14529 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
CUX2O14529 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC29.93■■■□□ 2.38
CUX2O14529 POLE2-203ENST00000553805 496 ntTSL 2 BASIC29.93■■■□□ 2.38
CUX2O14529 KRT8P23-201ENST00000560090 1207 ntBASIC29.93■■■□□ 2.38
CUX2O14529 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC29.93■■■□□ 2.38
CUX2O14529 AC019129.2-201ENST00000609837 1235 ntBASIC29.93■■■□□ 2.38
CUX2O14529 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CUX2O14529 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CUX2O14529 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
CUX2O14529 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
CUX2O14529 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
CUX2O14529 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC29.92■■■□□ 2.38
CUX2O14529 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CUX2O14529 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC29.92■■■□□ 2.38
CUX2O14529 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CUX2O14529 AC132938.6-201ENST00000623828 1655 ntBASIC29.92■■■□□ 2.38
CUX2O14529 AL512384.1-201ENST00000406683 331 ntBASIC29.92■■■□□ 2.38
CUX2O14529 GATD1-206ENST00000526325 756 ntTSL 5 BASIC29.92■■■□□ 2.38
CUX2O14529 KRT17P8-201ENST00000540749 863 ntBASIC29.92■■■□□ 2.38
CUX2O14529 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CUX2O14529 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
CUX2O14529 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
CUX2O14529 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC29.92■■■□□ 2.38
CUX2O14529 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC29.92■■■□□ 2.38
CUX2O14529 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC29.92■■■□□ 2.38
CUX2O14529 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC29.92■■■□□ 2.38
CUX2O14529 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC29.92■■■□□ 2.38
CUX2O14529 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
CUX2O14529 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CUX2O14529 KRT8P44-201ENST00000441609 1350 ntBASIC29.91■■■□□ 2.38
CUX2O14529 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CUX2O14529 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC29.91■■■□□ 2.38
CUX2O14529 AKAP8P1-201ENST00000434743 1349 ntBASIC29.91■■■□□ 2.38
CUX2O14529 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC29.91■■■□□ 2.38
CUX2O14529 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC29.91■■■□□ 2.38
CUX2O14529 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CUX2O14529 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CUX2O14529 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC29.91■■■□□ 2.38
CUX2O14529 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC29.91■■■□□ 2.38
CUX2O14529 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CUX2O14529 RAB43P1-201ENST00000561790 589 ntBASIC29.91■■■□□ 2.38
CUX2O14529 IGHV3OR16-16-201ENST00000563644 343 ntBASIC29.91■■■□□ 2.38
CUX2O14529 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CUX2O14529 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC29.91■■■□□ 2.38
CUX2O14529 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
CUX2O14529 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CUX2O14529 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CUX2O14529 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC29.91■■■□□ 2.38
CUX2O14529 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CUX2O14529 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CUX2O14529 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CUX2O14529 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
CUX2O14529 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CUX2O14529 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CUX2O14529 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
CUX2O14529 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CUX2O14529 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
CUX2O14529 SPCS2P4-201ENST00000436160 681 ntBASIC29.9■■■□□ 2.38
CUX2O14529 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC29.9■■■□□ 2.38
CUX2O14529 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC29.9■■■□□ 2.38
CUX2O14529 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC29.9■■■□□ 2.38
CUX2O14529 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC29.9■■■□□ 2.38
CUX2O14529 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC29.9■■■□□ 2.38
CUX2O14529 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CUX2O14529 AC073130.3-201ENST00000624389 2278 ntBASIC29.9■■■□□ 2.38
CUX2O14529 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC29.89■■■□□ 2.38
CUX2O14529 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC29.89■■■□□ 2.38
CUX2O14529 FAM185BP-201ENST00000443595 716 ntBASIC29.89■■■□□ 2.38
CUX2O14529 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
CUX2O14529 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC29.89■■■□□ 2.38
CUX2O14529 API5-211ENST00000534695 560 ntTSL 5 BASIC29.89■■■□□ 2.38
CUX2O14529 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
CUX2O14529 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC29.89■■■□□ 2.38
CUX2O14529 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CUX2O14529 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
CUX2O14529 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
CUX2O14529 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.37
CUX2O14529 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.37
CUX2O14529 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC29.89■■■□□ 2.37
CUX2O14529 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
CUX2O14529 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC29.88■■■□□ 2.37
CUX2O14529 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC29.88■■■□□ 2.37
CUX2O14529 AL513480.1-201ENST00000451731 511 ntBASIC29.88■■■□□ 2.37
CUX2O14529 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC29.88■■■□□ 2.37
CUX2O14529 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC29.88■■■□□ 2.37
CUX2O14529 AC092552.1-201ENST00000547243 906 ntBASIC29.88■■■□□ 2.37
CUX2O14529 RARRES2P8-201ENST00000566335 367 ntBASIC29.88■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms