Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
O00370 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
O00370 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.85■□□□□ 0.61
O00370 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
O00370 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.85■□□□□ 0.61
O00370 NSUN5P1-202ENST00000421140 1535 ntBASIC18.85■□□□□ 0.61
O00370 NSUN5P2-203ENST00000457352 1529 ntBASIC18.85■□□□□ 0.61
O00370 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.85■□□□□ 0.61
O00370 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.85■□□□□ 0.61
O00370 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.85■□□□□ 0.61
O00370 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
O00370 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
O00370 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
O00370 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.85■□□□□ 0.61
O00370 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.85■□□□□ 0.61
O00370 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.85■□□□□ 0.61
O00370 AC074051.2-201ENST00000565115 352 ntBASIC18.85■□□□□ 0.61
O00370 AC012615.1-201ENST00000565797 1299 ntBASIC18.85■□□□□ 0.61
O00370 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.85■□□□□ 0.61
O00370 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
O00370 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
O00370 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
O00370 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
O00370 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
O00370 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.84■□□□□ 0.61
O00370 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 AC012313.1-201ENST00000593393 3059 ntBASIC18.84■□□□□ 0.61
O00370 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
O00370 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
O00370 AC007967.3-201ENST00000434308 558 ntBASIC18.84■□□□□ 0.61
O00370 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.84■□□□□ 0.61
O00370 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.84■□□□□ 0.61
O00370 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.84■□□□□ 0.61
O00370 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.84■□□□□ 0.61
O00370 BNIP3P18-201ENST00000593976 575 ntBASIC18.84■□□□□ 0.61
O00370 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
O00370 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.84■□□□□ 0.61
O00370 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
O00370 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.84■□□□□ 0.61
O00370 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.84■□□□□ 0.61
O00370 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.84■□□□□ 0.61
O00370 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
O00370 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.84■□□□□ 0.61
O00370 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.84■□□□□ 0.61
O00370 AC106820.2-201ENST00000563775 3264 ntBASIC18.84■□□□□ 0.61
O00370 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
O00370 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
O00370 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.83■□□□□ 0.61
O00370 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
O00370 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
O00370 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
O00370 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.83■□□□□ 0.61
O00370 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
O00370 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
O00370 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
O00370 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
O00370 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.83■□□□□ 0.61
O00370 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
O00370 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.83■□□□□ 0.61
O00370 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
O00370 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
O00370 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
O00370 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.83■□□□□ 0.6
O00370 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
O00370 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
O00370 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
O00370 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.83■□□□□ 0.6
O00370 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.83■□□□□ 0.6
O00370 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.83■□□□□ 0.6
O00370 AC104819.1-201ENST00000504587 486 ntBASIC18.83■□□□□ 0.6
O00370 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.83■□□□□ 0.6
O00370 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
O00370 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.83■□□□□ 0.6
O00370 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.83■□□□□ 0.6
O00370 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.83■□□□□ 0.6
O00370 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
O00370 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
O00370 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
O00370 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.83■□□□□ 0.6
O00370 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.83■□□□□ 0.6
O00370 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
O00370 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
O00370 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
O00370 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
O00370 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.83■□□□□ 0.6
O00370 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 250.1 ms