Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.56□□□□□ -0.24
COLCA2A8K830 AC233992.3-201ENST00000607491 485 ntBASIC13.56□□□□□ -0.24
COLCA2A8K830 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.56□□□□□ -0.24
COLCA2A8K830 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.56□□□□□ -0.24
COLCA2A8K830 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.56□□□□□ -0.24
COLCA2A8K830 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COLCA2A8K830 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
COLCA2A8K830 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COLCA2A8K830 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
COLCA2A8K830 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.55□□□□□ -0.24
COLCA2A8K830 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.55□□□□□ -0.24
COLCA2A8K830 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COLCA2A8K830 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.55□□□□□ -0.24
COLCA2A8K830 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COLCA2A8K830 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
COLCA2A8K830 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
COLCA2A8K830 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
COLCA2A8K830 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COLCA2A8K830 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COLCA2A8K830 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COLCA2A8K830 MIR4449-201ENST00000578365 66 ntBASIC13.55□□□□□ -0.24
COLCA2A8K830 AC008764.7-201ENST00000593779 1081 ntBASIC13.55□□□□□ -0.24
COLCA2A8K830 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
COLCA2A8K830 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.55□□□□□ -0.24
COLCA2A8K830 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
COLCA2A8K830 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COLCA2A8K830 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
COLCA2A8K830 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
COLCA2A8K830 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.55□□□□□ -0.24
COLCA2A8K830 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
COLCA2A8K830 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COLCA2A8K830 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
COLCA2A8K830 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.55□□□□□ -0.24
COLCA2A8K830 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
COLCA2A8K830 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.54□□□□□ -0.24
COLCA2A8K830 AC100803.2-201ENST00000562459 1963 ntBASIC13.54□□□□□ -0.24
COLCA2A8K830 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
COLCA2A8K830 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.54□□□□□ -0.24
COLCA2A8K830 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
COLCA2A8K830 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
COLCA2A8K830 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.54□□□□□ -0.24
COLCA2A8K830 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
COLCA2A8K830 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
COLCA2A8K830 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.54□□□□□ -0.24
COLCA2A8K830 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.54□□□□□ -0.24
COLCA2A8K830 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.54□□□□□ -0.24
COLCA2A8K830 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
COLCA2A8K830 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.54□□□□□ -0.24
COLCA2A8K830 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 AC019069.1-201ENST00000610008 1333 ntBASIC13.54□□□□□ -0.24
COLCA2A8K830 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
COLCA2A8K830 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
COLCA2A8K830 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COLCA2A8K830 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.53□□□□□ -0.24
COLCA2A8K830 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.53□□□□□ -0.24
COLCA2A8K830 LINC02012-201ENST00000608206 1725 ntBASIC13.53□□□□□ -0.24
COLCA2A8K830 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COLCA2A8K830 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COLCA2A8K830 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COLCA2A8K830 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COLCA2A8K830 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COLCA2A8K830 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.53□□□□□ -0.24
COLCA2A8K830 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COLCA2A8K830 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
COLCA2A8K830 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
COLCA2A8K830 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.53□□□□□ -0.24
COLCA2A8K830 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COLCA2A8K830 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COLCA2A8K830 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COLCA2A8K830 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.53□□□□□ -0.24
COLCA2A8K830 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
COLCA2A8K830 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms