Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.23■□□□□ 0.35
C4orf47A7E2U8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 AC096734.2-201ENST00000562054 433 ntBASIC17.23■□□□□ 0.35
C4orf47A7E2U8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 AC005498.2-205ENST00000593218 784 ntBASIC17.23■□□□□ 0.35
C4orf47A7E2U8 AC010654.1-201ENST00000615722 808 ntBASIC17.23■□□□□ 0.35
C4orf47A7E2U8 AC010507.1-201ENST00000633895 436 ntBASIC17.23■□□□□ 0.35
C4orf47A7E2U8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 NEFHP1-201ENST00000412845 2629 ntBASIC17.22■□□□□ 0.35
C4orf47A7E2U8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 AC074386.1-202ENST00000463561 864 ntBASIC17.22■□□□□ 0.35
C4orf47A7E2U8 HLA-J-202ENST00000469281 1241 ntBASIC17.22■□□□□ 0.35
C4orf47A7E2U8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 AC069262.1-201ENST00000539058 672 ntBASIC17.22■□□□□ 0.35
C4orf47A7E2U8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.22■□□□□ 0.35
C4orf47A7E2U8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 MRPL20P1-201ENST00000400819 433 ntBASIC17.21■□□□□ 0.35
C4orf47A7E2U8 AC005034.1-201ENST00000426657 489 ntBASIC17.21■□□□□ 0.35
C4orf47A7E2U8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 AL513210.1-201ENST00000629608 234 ntBASIC17.21■□□□□ 0.35
C4orf47A7E2U8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C4orf47A7E2U8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.21■□□□□ 0.34
C4orf47A7E2U8 AC025580.3-201ENST00000617932 1424 ntBASIC17.21■□□□□ 0.34
C4orf47A7E2U8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
C4orf47A7E2U8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
C4orf47A7E2U8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
C4orf47A7E2U8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 AC004461.1-201ENST00000412461 403 ntBASIC17.2■□□□□ 0.34
C4orf47A7E2U8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 AC091812.2-201ENST00000619081 385 ntBASIC17.2■□□□□ 0.34
C4orf47A7E2U8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
C4orf47A7E2U8 AL035252.4-201ENST00000624174 288 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms