Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 POM121L13P-201ENST00000422362 380 ntBASIC12.6□□□□□ -0.39
LINC01549A6NIU2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 DDX43P3-201ENST00000441064 443 ntBASIC12.6□□□□□ -0.39
LINC01549A6NIU2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 KRT16P5-201ENST00000455284 522 ntBASIC12.6□□□□□ -0.39
LINC01549A6NIU2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 GPAT2P1-201ENST00000444924 1672 ntBASIC12.6□□□□□ -0.39
LINC01549A6NIU2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 AL603756.1-201ENST00000606511 2163 ntBASIC12.6□□□□□ -0.39
LINC01549A6NIU2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01549A6NIU2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 MIR638-201ENST00000385237 100 ntBASIC12.59□□□□□ -0.39
LINC01549A6NIU2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 AC091390.4-202ENST00000476426 537 ntBASIC12.59□□□□□ -0.39
LINC01549A6NIU2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 AC026271.3-201ENST00000571884 352 ntBASIC12.59□□□□□ -0.39
LINC01549A6NIU2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 MIR6821-201ENST00000617625 74 ntBASIC12.59□□□□□ -0.39
LINC01549A6NIU2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms