Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 KRT8P47-201ENST00000604727 1398 ntBASIC12.47□□□□□ -0.41
LINC01546A6NGU7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 MIR4674-201ENST00000582457 87 ntBASIC12.47□□□□□ -0.41
LINC01546A6NGU7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 GUSBP6-202ENST00000438529 1198 ntBASIC12.46□□□□□ -0.41
LINC01546A6NGU7 CDCA4P2-201ENST00000441182 718 ntBASIC12.46□□□□□ -0.41
LINC01546A6NGU7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 AC011506.1-201ENST00000474329 610 ntBASIC12.46□□□□□ -0.41
LINC01546A6NGU7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01546A6NGU7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01546A6NGU7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms