Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 BX276092.7-203ENST00000637198 1536 ntBASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 AC090164.3-201ENST00000610780 2143 ntBASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 MED15P5-201ENST00000423150 992 ntBASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 AC109462.3-201ENST00000573934 613 ntBASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 AL356488.2-201ENST00000602755 427 ntBASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TBC1D3FA6NER0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 AC132938.5-201ENST00000624980 1813 ntBASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 AC140113.2-201ENST00000604370 208 ntBASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 FAM197Y3-203ENST00000618346 717 ntBASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 AC005593.1-201ENST00000624894 515 ntBASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3FA6NER0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 KLF4P1-201ENST00000412782 1185 ntBASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms