Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.2■□□□□ 0.66
CCDC66A2RUB6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 HYMAI-201ENST00000635591 3347 ntBASIC19.2■□□□□ 0.66
CCDC66A2RUB6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 CROCCP2-202ENST00000412962 2773 ntBASIC19.19■□□□□ 0.66
CCDC66A2RUB6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC66A2RUB6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 AC026471.5-201ENST00000615068 467 ntBASIC19.18■□□□□ 0.66
CCDC66A2RUB6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC66A2RUB6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 AC099343.3-201ENST00000605834 2503 ntBASIC19.17■□□□□ 0.66
CCDC66A2RUB6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms