Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC26■■□□□ 1.75
HFM1A2PYH4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC26■■□□□ 1.75
HFM1A2PYH4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HFM1A2PYH4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC26■■□□□ 1.75
HFM1A2PYH4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
HFM1A2PYH4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
HFM1A2PYH4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC25.99■■□□□ 1.75
HFM1A2PYH4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC25.99■■□□□ 1.75
HFM1A2PYH4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC25.99■■□□□ 1.75
HFM1A2PYH4 LINC00982-205ENST00000420957 435 ntBASIC25.99■■□□□ 1.75
HFM1A2PYH4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC25.99■■□□□ 1.75
HFM1A2PYH4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC25.99■■□□□ 1.75
HFM1A2PYH4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
HFM1A2PYH4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HFM1A2PYH4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HFM1A2PYH4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC25.99■■□□□ 1.75
HFM1A2PYH4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
HFM1A2PYH4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HFM1A2PYH4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HFM1A2PYH4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
HFM1A2PYH4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
HFM1A2PYH4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HFM1A2PYH4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC25.98■■□□□ 1.75
HFM1A2PYH4 LBH-204ENST00000406087 559 ntTSL 4 BASIC25.98■■□□□ 1.75
HFM1A2PYH4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC25.98■■□□□ 1.75
HFM1A2PYH4 AC009947.1-201ENST00000444350 727 ntBASIC25.98■■□□□ 1.75
HFM1A2PYH4 RNA5SP415-201ENST00000517246 115 ntBASIC25.98■■□□□ 1.75
HFM1A2PYH4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HFM1A2PYH4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HFM1A2PYH4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
HFM1A2PYH4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HFM1A2PYH4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
HFM1A2PYH4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HFM1A2PYH4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
HFM1A2PYH4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
HFM1A2PYH4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
HFM1A2PYH4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HFM1A2PYH4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HFM1A2PYH4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
HFM1A2PYH4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
HFM1A2PYH4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC25.98■■□□□ 1.75
HFM1A2PYH4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
HFM1A2PYH4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HFM1A2PYH4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HFM1A2PYH4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC25.97■■□□□ 1.75
HFM1A2PYH4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
HFM1A2PYH4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HFM1A2PYH4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC25.97■■□□□ 1.75
HFM1A2PYH4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC25.97■■□□□ 1.75
HFM1A2PYH4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC25.97■■□□□ 1.75
HFM1A2PYH4 AF228730.7-201ENST00000641842 219 ntBASIC25.97■■□□□ 1.75
HFM1A2PYH4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
HFM1A2PYH4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC25.97■■□□□ 1.75
HFM1A2PYH4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
HFM1A2PYH4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC25.97■■□□□ 1.75
HFM1A2PYH4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HFM1A2PYH4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC25.97■■□□□ 1.75
HFM1A2PYH4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HFM1A2PYH4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HFM1A2PYH4 INIP-202ENST00000374236 874 ntTSL 2 BASIC25.97■■□□□ 1.75
HFM1A2PYH4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
HFM1A2PYH4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
HFM1A2PYH4 UNC93B6-202ENST00000528242 690 ntBASIC25.97■■□□□ 1.75
HFM1A2PYH4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
HFM1A2PYH4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HFM1A2PYH4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
HFM1A2PYH4 AC097637.2-201ENST00000624096 1997 ntBASIC25.96■■□□□ 1.75
HFM1A2PYH4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC25.96■■□□□ 1.75
HFM1A2PYH4 AC104109.2-201ENST00000602919 1418 ntBASIC25.96■■□□□ 1.75
HFM1A2PYH4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
HFM1A2PYH4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
HFM1A2PYH4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
HFM1A2PYH4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
HFM1A2PYH4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
HFM1A2PYH4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC25.96■■□□□ 1.75
HFM1A2PYH4 MIR574-201ENST00000385209 96 ntBASIC25.96■■□□□ 1.75
HFM1A2PYH4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC25.96■■□□□ 1.75
HFM1A2PYH4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HFM1A2PYH4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
HFM1A2PYH4 GNAS-203ENST00000306120 1878 ntBASIC25.96■■□□□ 1.75
HFM1A2PYH4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
HFM1A2PYH4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC25.95■■□□□ 1.75
HFM1A2PYH4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC25.95■■□□□ 1.74
HFM1A2PYH4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
HFM1A2PYH4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
HFM1A2PYH4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC25.95■■□□□ 1.74
HFM1A2PYH4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC25.95■■□□□ 1.74
HFM1A2PYH4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
HFM1A2PYH4 RPL13AP23-201ENST00000480739 586 ntBASIC25.95■■□□□ 1.74
HFM1A2PYH4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC25.95■■□□□ 1.74
HFM1A2PYH4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC25.95■■□□□ 1.74
HFM1A2PYH4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC25.95■■□□□ 1.74
HFM1A2PYH4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC25.95■■□□□ 1.74
HFM1A2PYH4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC25.95■■□□□ 1.74
HFM1A2PYH4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC25.95■■□□□ 1.74
HFM1A2PYH4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC25.95■■□□□ 1.74
HFM1A2PYH4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC25.95■■□□□ 1.74
HFM1A2PYH4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC25.94■■□□□ 1.74
HFM1A2PYH4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC25.94■■□□□ 1.74
HFM1A2PYH4 AC134043.2-201ENST00000624206 2238 ntBASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms