Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 AC007663.1-201ENST00000438948 1240 ntBASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 CCR12P-201ENST00000446203 998 ntBASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 AP003071.4-201ENST00000562276 1284 ntBASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 AP001412.1-201ENST00000608405 714 ntBASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 AC116407.2-201ENST00000613639 860 ntBASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 AGGF1P2-201ENST00000426656 2106 ntBASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRAV5A0A0B4J249 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 PCDHA14-201ENST00000506751 2298 ntBASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 AL390955.1-201ENST00000428694 934 ntBASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 AL158047.1-201ENST00000445918 881 ntBASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 SEC1P-202ENST00000473944 940 ntBASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 AC233702.5-201ENST00000584107 538 ntBASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 ITM2C-210ENST00000620962 501 ntBASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV5A0A0B4J249 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 AC060834.1-201ENST00000443027 2032 ntBASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 PCDHB19P-201ENST00000570871 2371 ntBASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms