Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 HTR7P1-202ENST00000624664 4411 ntBASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC097374.2-201ENST00000618617 1306 ntBASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC010203.1-204ENST00000548782 407 ntBASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 AL031432.5-201ENST00000641059 760 ntBASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC010460.3-201ENST00000511359 1579 ntBASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV5-3A0A0A0MS03 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 COX5BP2-201ENST00000392354 334 ntBASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 COX11P1-201ENST00000489116 835 ntBASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 AP003733.1-201ENST00000491725 852 ntBASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC140113.3-201ENST00000605663 199 ntBASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC093525.9-201ENST00000624961 1746 ntBASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC092053.1-201ENST00000605787 1936 ntBASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV5-3A0A0A0MS03 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 PCDHB19P-201ENST00000570871 2371 ntBASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms