Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC187A0A096LP49 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 STK19B-204ENST00000512515 211 ntBASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 AC019129.2-201ENST00000609837 1235 ntBASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC187A0A096LP49 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 HCG11-201ENST00000411553 5696 ntBASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 IGHV3-52-201ENST00000519770 353 ntBASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 PDPK2P-202ENST00000562415 1191 ntBASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 AP002472.1-201ENST00000577490 586 ntBASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 GGTLC5P-201ENST00000617623 998 ntBASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 AC073592.3-201ENST00000625118 1834 ntBASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC187A0A096LP49 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 BX276092.7-203ENST00000637198 1536 ntBASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 IGLL3P-201ENST00000412472 434 ntBASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 AL645939.2-201ENST00000427340 991 ntBASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 AC096734.2-201ENST00000562054 433 ntBASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 STK25P1-201ENST00000585406 838 ntBASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC187A0A096LP49 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms