Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC26.46■■□□□ 1.83
CDC42BPBQ9Y5S2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC26.45■■□□□ 1.83
CDC42BPBQ9Y5S2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC26.45■■□□□ 1.83
CDC42BPBQ9Y5S2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC26.45■■□□□ 1.83
CDC42BPBQ9Y5S2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
CDC42BPBQ9Y5S2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC26.45■■□□□ 1.83
CDC42BPBQ9Y5S2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
CDC42BPBQ9Y5S2 KRT18P32-201ENST00000424695 1287 ntBASIC26.45■■□□□ 1.83
CDC42BPBQ9Y5S2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC26.45■■□□□ 1.83
CDC42BPBQ9Y5S2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
CDC42BPBQ9Y5S2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
CDC42BPBQ9Y5S2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CDC42BPBQ9Y5S2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
CDC42BPBQ9Y5S2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC26.45■■□□□ 1.83
CDC42BPBQ9Y5S2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
CDC42BPBQ9Y5S2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CDC42BPBQ9Y5S2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
CDC42BPBQ9Y5S2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC26.45■■□□□ 1.82
CDC42BPBQ9Y5S2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC26.45■■□□□ 1.82
CDC42BPBQ9Y5S2 PI4KAP1-204ENST00000612579 1703 ntBASIC26.45■■□□□ 1.82
CDC42BPBQ9Y5S2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC26.45■■□□□ 1.82
CDC42BPBQ9Y5S2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC26.45■■□□□ 1.82
CDC42BPBQ9Y5S2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC26.45■■□□□ 1.82
CDC42BPBQ9Y5S2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
CDC42BPBQ9Y5S2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC26.45■■□□□ 1.82
CDC42BPBQ9Y5S2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CDC42BPBQ9Y5S2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 CD99-202ENST00000381180 530 ntTSL 2 BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 GPS2P2-201ENST00000430745 888 ntBASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 WIZP1-201ENST00000531444 2299 ntBASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPBQ9Y5S2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 AL135999.2-201ENST00000622438 1686 ntBASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 TIMM8BP1-201ENST00000452384 211 ntBASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 AC004449.1-201ENST00000564240 433 ntBASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 REXO1L3P-201ENST00000622202 1288 ntBASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
CDC42BPBQ9Y5S2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 AL135744.1-201ENST00000565098 629 ntBASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 AC051619.7-201ENST00000568314 623 ntBASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 AP000997.3-201ENST00000623333 2250 ntBASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPBQ9Y5S2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC26.41■■□□□ 1.82
CDC42BPBQ9Y5S2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC26.41■■□□□ 1.82
CDC42BPBQ9Y5S2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDC42BPBQ9Y5S2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDC42BPBQ9Y5S2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDC42BPBQ9Y5S2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDC42BPBQ9Y5S2 MIR661-201ENST00000384842 89 ntBASIC26.41■■□□□ 1.82
CDC42BPBQ9Y5S2 FAM86GP-201ENST00000448322 971 ntBASIC26.41■■□□□ 1.82
CDC42BPBQ9Y5S2 SPDYE11-202ENST00000450699 704 ntBASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms