Protein–RNA interactions for Protein: Q9Y5J5

PHLDA3, Pleckstrin homology-like domain family A member 3, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3Q9Y5J5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PHLDA3Q9Y5J5 LINC00602-201ENST00000629776 2065 ntBASIC13.12□□□□□ -0.31
PHLDA3Q9Y5J5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PHLDA3Q9Y5J5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PHLDA3Q9Y5J5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.12□□□□□ -0.31
PHLDA3Q9Y5J5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.12□□□□□ -0.31
PHLDA3Q9Y5J5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PHLDA3Q9Y5J5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PHLDA3Q9Y5J5 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PHLDA3Q9Y5J5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PHLDA3Q9Y5J5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PHLDA3Q9Y5J5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 AL353719.1-201ENST00000566847 864 ntBASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 AP005242.2-201ENST00000580065 1175 ntBASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 REXO1L10P-201ENST00000615707 1290 ntBASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 REXO1L12P-201ENST00000622156 912 ntBASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PHLDA3Q9Y5J5 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 CROCCP2-202ENST00000412962 2773 ntBASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 KRT18P29-201ENST00000397031 1267 ntBASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 BX088651.1-201ENST00000540551 451 ntBASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PHLDA3Q9Y5J5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms