Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 KRT18P31-201ENST00000506277 1292 ntBASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 RNF126P1-202ENST00000569893 925 ntBASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA4Q9Y5G9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA4Q9Y5G9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PCDHGA4Q9Y5G9 GMCL1P1-201ENST00000463439 1581 ntBASIC17.52■□□□□ 0.39
PCDHGA4Q9Y5G9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA4Q9Y5G9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA4Q9Y5G9 AL024508.2-201ENST00000607749 1894 ntBASIC17.52■□□□□ 0.39
PCDHGA4Q9Y5G9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.52■□□□□ 0.39
PCDHGA4Q9Y5G9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGA4Q9Y5G9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA4Q9Y5G9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 AC106795.1-205ENST00000512851 1056 ntBASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 AP002469.2-201ENST00000531724 424 ntBASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 AC135050.7-201ENST00000624508 2218 ntBASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA4Q9Y5G9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 ESPNP-201ENST00000270691 2015 ntBASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms